Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nhej1Q3KNJ2 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nhej1Q3KNJ2 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Nhej1Q3KNJ2 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nhej1Q3KNJ2 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nhej1Q3KNJ2 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nhej1Q3KNJ2 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nhej1Q3KNJ2 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nhej1Q3KNJ2 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nhej1Q3KNJ2 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nhej1Q3KNJ2 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nhej1Q3KNJ2 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nhej1Q3KNJ2 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nhej1Q3KNJ2 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nhej1Q3KNJ2 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nhej1Q3KNJ2 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Nhej1Q3KNJ2 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nhej1Q3KNJ2 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nhej1Q3KNJ2 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nhej1Q3KNJ2 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.3■□□□□ 0.2
Nhej1Q3KNJ2 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nhej1Q3KNJ2 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Nhej1Q3KNJ2 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.3■□□□□ 0.2
Nhej1Q3KNJ2 Gm8344-201ENSMUST00000119813 856 ntBASIC16.3■□□□□ 0.2
Nhej1Q3KNJ2 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.3■□□□□ 0.2
Nhej1Q3KNJ2 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nhej1Q3KNJ2 Gm18622-201ENSMUST00000219361 595 ntBASIC16.3■□□□□ 0.2
Nhej1Q3KNJ2 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nhej1Q3KNJ2 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nhej1Q3KNJ2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nhej1Q3KNJ2 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nhej1Q3KNJ2 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nhej1Q3KNJ2 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Nhej1Q3KNJ2 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nhej1Q3KNJ2 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nhej1Q3KNJ2 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.3■□□□□ 0.2
Nhej1Q3KNJ2 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nhej1Q3KNJ2 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nhej1Q3KNJ2 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Nhej1Q3KNJ2 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Nhej1Q3KNJ2 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.29■□□□□ 0.2
Nhej1Q3KNJ2 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nhej1Q3KNJ2 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Nhej1Q3KNJ2 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nhej1Q3KNJ2 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nhej1Q3KNJ2 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nhej1Q3KNJ2 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.29■□□□□ 0.2
Nhej1Q3KNJ2 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Nhej1Q3KNJ2 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.29■□□□□ 0.2
Nhej1Q3KNJ2 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.29■□□□□ 0.2
Nhej1Q3KNJ2 Gm6659-201ENSMUST00000174752 547 ntBASIC16.29■□□□□ 0.2
Nhej1Q3KNJ2 Gm25745-201ENSMUST00000174945 133 ntBASIC16.29■□□□□ 0.2
Nhej1Q3KNJ2 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.29■□□□□ 0.2
Nhej1Q3KNJ2 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.29■□□□□ 0.2
Nhej1Q3KNJ2 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nhej1Q3KNJ2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nhej1Q3KNJ2 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nhej1Q3KNJ2 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nhej1Q3KNJ2 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Nhej1Q3KNJ2 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nhej1Q3KNJ2 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.29■□□□□ 0.2
Nhej1Q3KNJ2 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nhej1Q3KNJ2 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nhej1Q3KNJ2 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Nhej1Q3KNJ2 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nhej1Q3KNJ2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nhej1Q3KNJ2 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nhej1Q3KNJ2 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Nhej1Q3KNJ2 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nhej1Q3KNJ2 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nhej1Q3KNJ2 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nhej1Q3KNJ2 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nhej1Q3KNJ2 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nhej1Q3KNJ2 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nhej1Q3KNJ2 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
Nhej1Q3KNJ2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nhej1Q3KNJ2 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nhej1Q3KNJ2 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nhej1Q3KNJ2 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.28■□□□□ 0.2
Nhej1Q3KNJ2 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.28■□□□□ 0.2
Nhej1Q3KNJ2 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nhej1Q3KNJ2 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.28■□□□□ 0.2
Nhej1Q3KNJ2 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nhej1Q3KNJ2 Gm15165-201ENSMUST00000118140 502 ntBASIC16.28■□□□□ 0.2
Nhej1Q3KNJ2 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nhej1Q3KNJ2 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Nhej1Q3KNJ2 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Nhej1Q3KNJ2 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Nhej1Q3KNJ2 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.28■□□□□ 0.2
Nhej1Q3KNJ2 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.28■□□□□ 0.2
Nhej1Q3KNJ2 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Nhej1Q3KNJ2 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nhej1Q3KNJ2 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nhej1Q3KNJ2 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nhej1Q3KNJ2 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nhej1Q3KNJ2 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nhej1Q3KNJ2 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Nhej1Q3KNJ2 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nhej1Q3KNJ2 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nhej1Q3KNJ2 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms