Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim63Q38HM4 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim63Q38HM4 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim63Q38HM4 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trim63Q38HM4 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Trim63Q38HM4 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Trim63Q38HM4 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.39
Trim63Q38HM4 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim63Q38HM4 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim63Q38HM4 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim63Q38HM4 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim63Q38HM4 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim63Q38HM4 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Trim63Q38HM4 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.64□□□□□ -0.39
Trim63Q38HM4 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim63Q38HM4 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim63Q38HM4 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim63Q38HM4 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim63Q38HM4 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trim63Q38HM4 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim63Q38HM4 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC12.64□□□□□ -0.39
Trim63Q38HM4 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC12.64□□□□□ -0.39
Trim63Q38HM4 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim63Q38HM4 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim63Q38HM4 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trim63Q38HM4 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Trim63Q38HM4 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim63Q38HM4 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim63Q38HM4 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim63Q38HM4 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim63Q38HM4 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim63Q38HM4 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim63Q38HM4 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trim63Q38HM4 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim63Q38HM4 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Trim63Q38HM4 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim63Q38HM4 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trim63Q38HM4 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim63Q38HM4 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim63Q38HM4 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim63Q38HM4 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim63Q38HM4 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.63□□□□□ -0.39
Trim63Q38HM4 Gm10129-202ENSMUST00000193100 1316 ntBASIC12.63□□□□□ -0.39
Trim63Q38HM4 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim63Q38HM4 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim63Q38HM4 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim63Q38HM4 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim63Q38HM4 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trim63Q38HM4 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim63Q38HM4 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Trim63Q38HM4 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim63Q38HM4 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trim63Q38HM4 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim63Q38HM4 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim63Q38HM4 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim63Q38HM4 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim63Q38HM4 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trim63Q38HM4 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trim63Q38HM4 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim63Q38HM4 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim63Q38HM4 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim63Q38HM4 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim63Q38HM4 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trim63Q38HM4 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim63Q38HM4 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim63Q38HM4 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim63Q38HM4 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.63□□□□□ -0.39
Trim63Q38HM4 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim63Q38HM4 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.63□□□□□ -0.39
Trim63Q38HM4 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trim63Q38HM4 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim63Q38HM4 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim63Q38HM4 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trim63Q38HM4 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trim63Q38HM4 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim63Q38HM4 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim63Q38HM4 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim63Q38HM4 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim63Q38HM4 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim63Q38HM4 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trim63Q38HM4 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trim63Q38HM4 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim63Q38HM4 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
Trim63Q38HM4 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim63Q38HM4 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim63Q38HM4 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.62□□□□□ -0.39
Trim63Q38HM4 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim63Q38HM4 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trim63Q38HM4 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim63Q38HM4 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim63Q38HM4 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim63Q38HM4 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trim63Q38HM4 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim63Q38HM4 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim63Q38HM4 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trim63Q38HM4 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim63Q38HM4 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim63Q38HM4 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim63Q38HM4 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim63Q38HM4 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms