Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
GabpaQ00422 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GabpaQ00422 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GabpaQ00422 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
GabpaQ00422 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.29■□□□□ 0.36
GabpaQ00422 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GabpaQ00422 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
GabpaQ00422 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.29■□□□□ 0.36
GabpaQ00422 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GabpaQ00422 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
GabpaQ00422 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GabpaQ00422 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GabpaQ00422 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.29■□□□□ 0.36
GabpaQ00422 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GabpaQ00422 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.29■□□□□ 0.36
GabpaQ00422 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
GabpaQ00422 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
GabpaQ00422 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.29■□□□□ 0.36
GabpaQ00422 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GabpaQ00422 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
GabpaQ00422 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.28■□□□□ 0.36
GabpaQ00422 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
GabpaQ00422 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GabpaQ00422 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GabpaQ00422 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GabpaQ00422 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
GabpaQ00422 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.28■□□□□ 0.36
GabpaQ00422 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
GabpaQ00422 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GabpaQ00422 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
GabpaQ00422 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.28■□□□□ 0.36
GabpaQ00422 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.28■□□□□ 0.36
GabpaQ00422 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
GabpaQ00422 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
GabpaQ00422 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GabpaQ00422 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
GabpaQ00422 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GabpaQ00422 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GabpaQ00422 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
GabpaQ00422 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
GabpaQ00422 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GabpaQ00422 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GabpaQ00422 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
GabpaQ00422 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GabpaQ00422 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.27■□□□□ 0.36
GabpaQ00422 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
GabpaQ00422 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GabpaQ00422 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GabpaQ00422 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GabpaQ00422 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GabpaQ00422 Gm22065-201ENSMUST00000103753 110 ntBASIC17.27■□□□□ 0.36
GabpaQ00422 Gm22066-201ENSMUST00000103761 110 ntBASIC17.27■□□□□ 0.36
GabpaQ00422 Gm24932-201ENSMUST00000103763 110 ntBASIC17.27■□□□□ 0.36
GabpaQ00422 Gm24115-201ENSMUST00000103799 110 ntBASIC17.27■□□□□ 0.36
GabpaQ00422 Gm22190-201ENSMUST00000103827 110 ntBASIC17.27■□□□□ 0.36
GabpaQ00422 Gm22191-201ENSMUST00000103831 110 ntBASIC17.27■□□□□ 0.36
GabpaQ00422 Gm24721-201ENSMUST00000103849 110 ntBASIC17.27■□□□□ 0.36
GabpaQ00422 Gm28018-201ENSMUST00000103869 110 ntBASIC17.27■□□□□ 0.36
GabpaQ00422 Gm26399-201ENSMUST00000103937 110 ntBASIC17.27■□□□□ 0.36
GabpaQ00422 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.27■□□□□ 0.36
GabpaQ00422 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GabpaQ00422 Gm25349-201ENSMUST00000177728 110 ntBASIC17.27■□□□□ 0.36
GabpaQ00422 Gm23616-201ENSMUST00000177797 110 ntBASIC17.27■□□□□ 0.36
GabpaQ00422 Gm25871-201ENSMUST00000177816 110 ntBASIC17.27■□□□□ 0.36
GabpaQ00422 Gm24752-201ENSMUST00000178240 110 ntBASIC17.27■□□□□ 0.36
GabpaQ00422 Gm24496-201ENSMUST00000178287 110 ntBASIC17.27■□□□□ 0.36
GabpaQ00422 Gm25649-201ENSMUST00000178476 110 ntBASIC17.27■□□□□ 0.36
GabpaQ00422 Gm25548-201ENSMUST00000178681 110 ntBASIC17.27■□□□□ 0.36
GabpaQ00422 Gm23147-201ENSMUST00000178841 110 ntBASIC17.27■□□□□ 0.36
GabpaQ00422 Gm26095-201ENSMUST00000179270 110 ntBASIC17.27■□□□□ 0.36
GabpaQ00422 Gm22171-201ENSMUST00000179283 110 ntBASIC17.27■□□□□ 0.36
GabpaQ00422 Gm23936-201ENSMUST00000179354 110 ntBASIC17.27■□□□□ 0.36
GabpaQ00422 Gm22619-201ENSMUST00000179516 110 ntBASIC17.27■□□□□ 0.36
GabpaQ00422 Gm25255-201ENSMUST00000179579 110 ntBASIC17.27■□□□□ 0.36
GabpaQ00422 Gm24755-201ENSMUST00000179691 110 ntBASIC17.27■□□□□ 0.36
GabpaQ00422 Gm26506-201ENSMUST00000179692 110 ntBASIC17.27■□□□□ 0.36
GabpaQ00422 Gm25086-201ENSMUST00000179931 110 ntBASIC17.27■□□□□ 0.36
GabpaQ00422 Gm23243-201ENSMUST00000180047 110 ntBASIC17.27■□□□□ 0.36
GabpaQ00422 Gm24659-201ENSMUST00000180212 110 ntBASIC17.27■□□□□ 0.36
GabpaQ00422 Gm24169-201ENSMUST00000180244 110 ntBASIC17.27■□□□□ 0.36
GabpaQ00422 Gm23689-201ENSMUST00000180354 110 ntBASIC17.27■□□□□ 0.36
GabpaQ00422 Gm27359-201ENSMUST00000184153 110 ntBASIC17.27■□□□□ 0.36
GabpaQ00422 Gm27785-201ENSMUST00000184268 110 ntBASIC17.27■□□□□ 0.36
GabpaQ00422 Gm27466-201ENSMUST00000184396 110 ntBASIC17.27■□□□□ 0.36
GabpaQ00422 Gm27703-201ENSMUST00000184836 110 ntBASIC17.27■□□□□ 0.36
GabpaQ00422 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.27■□□□□ 0.36
GabpaQ00422 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.27■□□□□ 0.36
GabpaQ00422 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.27■□□□□ 0.36
GabpaQ00422 AC159114.1-201ENSMUST00000220349 266 ntBASIC17.27■□□□□ 0.36
GabpaQ00422 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.27■□□□□ 0.36
GabpaQ00422 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.27■□□□□ 0.36
GabpaQ00422 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.27■□□□□ 0.36
GabpaQ00422 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
GabpaQ00422 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.27■□□□□ 0.35
GabpaQ00422 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GabpaQ00422 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GabpaQ00422 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
GabpaQ00422 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GabpaQ00422 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GabpaQ00422 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms