Protein–RNA interactions for Protein: P97785

Gfra1, GDNF family receptor alpha-1, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra1P97785 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.64□□□□□ -0.39
Gfra1P97785 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gfra1P97785 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Gfra1P97785 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gfra1P97785 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Gfra1P97785 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gfra1P97785 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gfra1P97785 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gfra1P97785 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
Gfra1P97785 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gfra1P97785 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Gfra1P97785 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gfra1P97785 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gfra1P97785 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gfra1P97785 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Gfra1P97785 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gfra1P97785 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gfra1P97785 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gfra1P97785 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gfra1P97785 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gfra1P97785 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gfra1P97785 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Gfra1P97785 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gfra1P97785 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gfra1P97785 Gm14494-201ENSMUST00000118786 435 ntBASIC12.63□□□□□ -0.39
Gfra1P97785 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gfra1P97785 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gfra1P97785 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.63□□□□□ -0.39
Gfra1P97785 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gfra1P97785 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gfra1P97785 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gfra1P97785 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gfra1P97785 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gfra1P97785 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gfra1P97785 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gfra1P97785 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.63□□□□□ -0.39
Gfra1P97785 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gfra1P97785 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gfra1P97785 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gfra1P97785 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gfra1P97785 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Gfra1P97785 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gfra1P97785 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gfra1P97785 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gfra1P97785 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.62□□□□□ -0.39
Gfra1P97785 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gfra1P97785 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gfra1P97785 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gfra1P97785 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gfra1P97785 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Gfra1P97785 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gfra1P97785 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Gfra1P97785 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gfra1P97785 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gfra1P97785 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gfra1P97785 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gfra1P97785 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.62□□□□□ -0.39
Gfra1P97785 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gfra1P97785 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.62□□□□□ -0.39
Gfra1P97785 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gfra1P97785 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.62□□□□□ -0.39
Gfra1P97785 Mir3113-201ENSMUST00000175478 76 ntBASIC12.62□□□□□ -0.39
Gfra1P97785 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.62□□□□□ -0.39
Gfra1P97785 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gfra1P97785 Gm5867-201ENSMUST00000063197 592 ntBASIC12.62□□□□□ -0.39
Gfra1P97785 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gfra1P97785 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gfra1P97785 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gfra1P97785 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gfra1P97785 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gfra1P97785 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gfra1P97785 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gfra1P97785 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gfra1P97785 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gfra1P97785 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gfra1P97785 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gfra1P97785 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gfra1P97785 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gfra1P97785 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.61□□□□□ -0.39
Gfra1P97785 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gfra1P97785 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Gfra1P97785 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gfra1P97785 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gfra1P97785 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Gfra1P97785 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Gfra1P97785 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gfra1P97785 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Gfra1P97785 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.61□□□□□ -0.39
Gfra1P97785 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.61□□□□□ -0.39
Gfra1P97785 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gfra1P97785 Gm27300-201ENSMUST00000184085 97 ntBASIC12.61□□□□□ -0.39
Gfra1P97785 Gm27335-201ENSMUST00000184758 97 ntBASIC12.61□□□□□ -0.39
Gfra1P97785 Gm2756-201ENSMUST00000195851 400 ntBASIC12.61□□□□□ -0.39
Gfra1P97785 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gfra1P97785 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gfra1P97785 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gfra1P97785 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gfra1P97785 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gfra1P97785 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gfra1P97785 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms