Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarcc1P97496 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Smarcc1P97496 Gm45293-201ENSMUST00000209754 1812 ntBASIC19.04■□□□□ 0.64
Smarcc1P97496 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC19.04■□□□□ 0.64
Smarcc1P97496 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Smarcc1P97496 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarcc1P97496 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarcc1P97496 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
Smarcc1P97496 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarcc1P97496 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarcc1P97496 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcc1P97496 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcc1P97496 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.03■□□□□ 0.64
Smarcc1P97496 Syt7-205ENSMUST00000224135 1557 ntBASIC19.03■□□□□ 0.64
Smarcc1P97496 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcc1P97496 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcc1P97496 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcc1P97496 Gm15487-201ENSMUST00000122373 465 ntBASIC19.03■□□□□ 0.64
Smarcc1P97496 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC19.03■□□□□ 0.64
Smarcc1P97496 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC19.03■□□□□ 0.64
Smarcc1P97496 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Smarcc1P97496 AC135669.1-201ENSMUST00000213585 412 ntBASIC19.03■□□□□ 0.64
Smarcc1P97496 Gm9063-201ENSMUST00000223299 582 ntBASIC19.03■□□□□ 0.64
Smarcc1P97496 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcc1P97496 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcc1P97496 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Smarcc1P97496 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Smarcc1P97496 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcc1P97496 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcc1P97496 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Smarcc1P97496 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC19.03■□□□□ 0.64
Smarcc1P97496 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Smarcc1P97496 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcc1P97496 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarcc1P97496 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarcc1P97496 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Smarcc1P97496 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarcc1P97496 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarcc1P97496 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC19.02■□□□□ 0.64
Smarcc1P97496 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarcc1P97496 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarcc1P97496 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC19.02■□□□□ 0.64
Smarcc1P97496 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Smarcc1P97496 Gm14767-201ENSMUST00000121559 586 ntBASIC19.02■□□□□ 0.64
Smarcc1P97496 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarcc1P97496 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarcc1P97496 Gm27920-201ENSMUST00000183953 96 ntBASIC19.02■□□□□ 0.64
Smarcc1P97496 Gm44855-201ENSMUST00000205725 362 ntBASIC19.02■□□□□ 0.64
Smarcc1P97496 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarcc1P97496 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarcc1P97496 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarcc1P97496 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Smarcc1P97496 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarcc1P97496 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Smarcc1P97496 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarcc1P97496 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smarcc1P97496 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smarcc1P97496 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcc1P97496 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcc1P97496 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcc1P97496 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcc1P97496 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Smarcc1P97496 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcc1P97496 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcc1P97496 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcc1P97496 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcc1P97496 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcc1P97496 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Smarcc1P97496 Gm14127-201ENSMUST00000117906 678 ntBASIC19.01■□□□□ 0.63
Smarcc1P97496 Gm14719-201ENSMUST00000121891 340 ntBASIC19.01■□□□□ 0.63
Smarcc1P97496 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC19.01■□□□□ 0.63
Smarcc1P97496 Gm18766-201ENSMUST00000189811 808 ntBASIC19.01■□□□□ 0.63
Smarcc1P97496 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcc1P97496 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcc1P97496 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcc1P97496 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC19.01■□□□□ 0.63
Smarcc1P97496 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcc1P97496 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcc1P97496 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
Smarcc1P97496 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcc1P97496 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcc1P97496 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Smarcc1P97496 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Smarcc1P97496 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcc1P97496 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcc1P97496 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcc1P97496 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcc1P97496 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcc1P97496 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcc1P97496 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smarcc1P97496 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcc1P97496 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Smarcc1P97496 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smarcc1P97496 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Smarcc1P97496 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Smarcc1P97496 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Smarcc1P97496 Gm7653-201ENSMUST00000214567 508 ntBASIC19■□□□□ 0.63
Smarcc1P97496 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcc1P97496 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcc1P97496 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms