Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
Trim43cP86449 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.61■□□□□ 0.25
Trim43cP86449 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim43cP86449 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim43cP86449 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim43cP86449 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.6■□□□□ 0.25
Trim43cP86449 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trim43cP86449 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim43cP86449 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim43cP86449 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim43cP86449 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.6■□□□□ 0.25
Trim43cP86449 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trim43cP86449 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim43cP86449 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim43cP86449 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trim43cP86449 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim43cP86449 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.6■□□□□ 0.25
Trim43cP86449 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.6■□□□□ 0.25
Trim43cP86449 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim43cP86449 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trim43cP86449 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim43cP86449 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.6■□□□□ 0.25
Trim43cP86449 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
Trim43cP86449 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trim43cP86449 Gm15590-201ENSMUST00000078419 552 ntBASIC16.6■□□□□ 0.25
Trim43cP86449 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trim43cP86449 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim43cP86449 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim43cP86449 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trim43cP86449 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trim43cP86449 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trim43cP86449 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim43cP86449 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.6■□□□□ 0.25
Trim43cP86449 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim43cP86449 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim43cP86449 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim43cP86449 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trim43cP86449 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trim43cP86449 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim43cP86449 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim43cP86449 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim43cP86449 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim43cP86449 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim43cP86449 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.59■□□□□ 0.25
Trim43cP86449 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim43cP86449 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.59■□□□□ 0.25
Trim43cP86449 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim43cP86449 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim43cP86449 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.59■□□□□ 0.25
Trim43cP86449 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim43cP86449 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.59■□□□□ 0.25
Trim43cP86449 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trim43cP86449 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim43cP86449 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.59■□□□□ 0.25
Trim43cP86449 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim43cP86449 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim43cP86449 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.59■□□□□ 0.25
Trim43cP86449 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim43cP86449 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim43cP86449 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim43cP86449 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim43cP86449 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim43cP86449 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim43cP86449 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim43cP86449 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Trim43cP86449 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim43cP86449 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim43cP86449 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim43cP86449 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim43cP86449 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Trim43cP86449 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim43cP86449 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim43cP86449 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim43cP86449 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim43cP86449 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
Trim43cP86449 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim43cP86449 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim43cP86449 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.58■□□□□ 0.24
Trim43cP86449 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.58■□□□□ 0.24
Trim43cP86449 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.58■□□□□ 0.24
Trim43cP86449 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.58■□□□□ 0.24
Trim43cP86449 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim43cP86449 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim43cP86449 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim43cP86449 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim43cP86449 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim43cP86449 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim43cP86449 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim43cP86449 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim43cP86449 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim43cP86449 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.58■□□□□ 0.24
Trim43cP86449 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.58■□□□□ 0.24
Trim43cP86449 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Trim43cP86449 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim43cP86449 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim43cP86449 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim43cP86449 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim43cP86449 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim43cP86449 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim43cP86449 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms