Protein–RNA interactions for Protein: P84444

Ccl21a, C-C motif chemokine 21a, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl21aP84444 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.67□□□□□ -0.38
Ccl21aP84444 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl21aP84444 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl21aP84444 Gm24543-201ENSMUST00000103867 82 ntBASIC12.67□□□□□ -0.38
Ccl21aP84444 Gm15824-201ENSMUST00000119516 955 ntBASIC12.67□□□□□ -0.38
Ccl21aP84444 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Ccl21aP84444 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.67□□□□□ -0.38
Ccl21aP84444 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.67□□□□□ -0.38
Ccl21aP84444 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.67□□□□□ -0.38
Ccl21aP84444 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.67□□□□□ -0.38
Ccl21aP84444 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.67□□□□□ -0.38
Ccl21aP84444 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.67□□□□□ -0.38
Ccl21aP84444 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl21aP84444 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ccl21aP84444 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl21aP84444 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ccl21aP84444 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.67□□□□□ -0.38
Ccl21aP84444 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl21aP84444 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl21aP84444 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl21aP84444 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl21aP84444 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl21aP84444 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl21aP84444 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl21aP84444 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl21aP84444 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl21aP84444 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl21aP84444 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl21aP84444 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.66□□□□□ -0.38
Ccl21aP84444 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.66□□□□□ -0.38
Ccl21aP84444 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.66□□□□□ -0.38
Ccl21aP84444 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl21aP84444 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl21aP84444 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl21aP84444 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.66□□□□□ -0.38
Ccl21aP84444 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl21aP84444 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC12.66□□□□□ -0.38
Ccl21aP84444 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl21aP84444 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ccl21aP84444 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ccl21aP84444 Mir6420-201ENSMUST00000185032 102 ntBASIC12.66□□□□□ -0.38
Ccl21aP84444 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.66□□□□□ -0.38
Ccl21aP84444 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.66□□□□□ -0.38
Ccl21aP84444 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl21aP84444 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl21aP84444 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl21aP84444 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl21aP84444 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl21aP84444 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.66□□□□□ -0.38
Ccl21aP84444 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl21aP84444 Gm5898-201ENSMUST00000121016 2071 ntBASIC12.66□□□□□ -0.38
Ccl21aP84444 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl21aP84444 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl21aP84444 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl21aP84444 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl21aP84444 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl21aP84444 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl21aP84444 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC12.65□□□□□ -0.38
Ccl21aP84444 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.65□□□□□ -0.38
Ccl21aP84444 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl21aP84444 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl21aP84444 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl21aP84444 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl21aP84444 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl21aP84444 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl21aP84444 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl21aP84444 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.65□□□□□ -0.38
Ccl21aP84444 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Ccl21aP84444 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl21aP84444 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl21aP84444 Shd-206ENSMUST00000225145 998 ntBASIC12.65□□□□□ -0.38
Ccl21aP84444 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.65□□□□□ -0.38
Ccl21aP84444 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl21aP84444 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.65□□□□□ -0.38
Ccl21aP84444 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl21aP84444 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl21aP84444 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC12.65□□□□□ -0.38
Ccl21aP84444 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Ccl21aP84444 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl21aP84444 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl21aP84444 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl21aP84444 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl21aP84444 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl21aP84444 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl21aP84444 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl21aP84444 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl21aP84444 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl21aP84444 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
Ccl21aP84444 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl21aP84444 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl21aP84444 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl21aP84444 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl21aP84444 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl21aP84444 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl21aP84444 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl21aP84444 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl21aP84444 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl21aP84444 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl21aP84444 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl21aP84444 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms