Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CiitaP79621 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CiitaP79621 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.52■□□□□ 0.24
CiitaP79621 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.52■□□□□ 0.24
CiitaP79621 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CiitaP79621 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CiitaP79621 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.52■□□□□ 0.23
CiitaP79621 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CiitaP79621 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CiitaP79621 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.52■□□□□ 0.23
CiitaP79621 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CiitaP79621 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.52■□□□□ 0.23
CiitaP79621 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.52■□□□□ 0.23
CiitaP79621 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CiitaP79621 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CiitaP79621 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CiitaP79621 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
CiitaP79621 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.51■□□□□ 0.23
CiitaP79621 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CiitaP79621 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.51■□□□□ 0.23
CiitaP79621 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.51■□□□□ 0.23
CiitaP79621 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CiitaP79621 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CiitaP79621 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CiitaP79621 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CiitaP79621 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CiitaP79621 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CiitaP79621 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CiitaP79621 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.51■□□□□ 0.23
CiitaP79621 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.51■□□□□ 0.23
CiitaP79621 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CiitaP79621 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CiitaP79621 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CiitaP79621 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CiitaP79621 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CiitaP79621 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CiitaP79621 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CiitaP79621 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CiitaP79621 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CiitaP79621 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CiitaP79621 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
CiitaP79621 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CiitaP79621 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CiitaP79621 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CiitaP79621 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CiitaP79621 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CiitaP79621 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CiitaP79621 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
CiitaP79621 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CiitaP79621 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CiitaP79621 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CiitaP79621 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.5■□□□□ 0.23
CiitaP79621 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CiitaP79621 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.5■□□□□ 0.23
CiitaP79621 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.5■□□□□ 0.23
CiitaP79621 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CiitaP79621 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CiitaP79621 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CiitaP79621 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CiitaP79621 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CiitaP79621 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CiitaP79621 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CiitaP79621 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CiitaP79621 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CiitaP79621 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CiitaP79621 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CiitaP79621 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CiitaP79621 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CiitaP79621 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CiitaP79621 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CiitaP79621 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CiitaP79621 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.49■□□□□ 0.23
CiitaP79621 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CiitaP79621 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.49■□□□□ 0.23
CiitaP79621 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.49■□□□□ 0.23
CiitaP79621 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CiitaP79621 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CiitaP79621 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CiitaP79621 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CiitaP79621 Gm27494-201ENSMUST00000184735 189 ntBASIC16.49■□□□□ 0.23
CiitaP79621 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.49■□□□□ 0.23
CiitaP79621 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.49■□□□□ 0.23
CiitaP79621 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.49■□□□□ 0.23
CiitaP79621 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CiitaP79621 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CiitaP79621 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CiitaP79621 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CiitaP79621 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CiitaP79621 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CiitaP79621 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CiitaP79621 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CiitaP79621 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CiitaP79621 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CiitaP79621 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CiitaP79621 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CiitaP79621 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CiitaP79621 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CiitaP79621 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.49■□□□□ 0.23
CiitaP79621 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CiitaP79621 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms