Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.41□□□□□ -0.26
Lsm6P62313 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.41□□□□□ -0.26
Lsm6P62313 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.41□□□□□ -0.26
Lsm6P62313 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.41□□□□□ -0.26
Lsm6P62313 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Lsm6P62313 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
Lsm6P62313 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm6P62313 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.41□□□□□ -0.26
Lsm6P62313 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm6P62313 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm6P62313 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm6P62313 Grk6-207ENSMUST00000225925 2769 ntBASIC13.41□□□□□ -0.26
Lsm6P62313 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.41□□□□□ -0.26
Lsm6P62313 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm6P62313 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm6P62313 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Lsm6P62313 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm6P62313 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm6P62313 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm6P62313 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm6P62313 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm6P62313 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm6P62313 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Lsm6P62313 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm6P62313 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm6P62313 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm6P62313 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm6P62313 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm6P62313 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm6P62313 Gm24589-201ENSMUST00000116692 94 ntBASIC13.4□□□□□ -0.26
Lsm6P62313 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm6P62313 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Lsm6P62313 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.4□□□□□ -0.26
Lsm6P62313 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.4□□□□□ -0.26
Lsm6P62313 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm6P62313 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm6P62313 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm6P62313 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.4□□□□□ -0.26
Lsm6P62313 Sybu-209ENSMUST00000228639 4113 ntBASIC13.4□□□□□ -0.26
Lsm6P62313 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.4□□□□□ -0.26
Lsm6P62313 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm6P62313 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm6P62313 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Lsm6P62313 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm6P62313 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Lsm6P62313 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm6P62313 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Lsm6P62313 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm6P62313 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm6P62313 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Lsm6P62313 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm6P62313 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm6P62313 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm6P62313 Gm18489-201ENSMUST00000172565 551 ntBASIC13.39□□□□□ -0.27
Lsm6P62313 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.39□□□□□ -0.27
Lsm6P62313 Gm6376-201ENSMUST00000209407 580 ntBASIC13.39□□□□□ -0.27
Lsm6P62313 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.39□□□□□ -0.27
Lsm6P62313 AC130671.1-201ENSMUST00000227384 1237 ntBASIC13.39□□□□□ -0.27
Lsm6P62313 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm6P62313 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm6P62313 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm6P62313 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm6P62313 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm6P62313 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm6P62313 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm6P62313 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm6P62313 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm6P62313 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm6P62313 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm6P62313 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm6P62313 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm6P62313 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm6P62313 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm6P62313 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm6P62313 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm6P62313 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm6P62313 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.39□□□□□ -0.27
Lsm6P62313 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Lsm6P62313 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm6P62313 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm6P62313 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm6P62313 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm6P62313 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm6P62313 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm6P62313 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm6P62313 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm6P62313 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm6P62313 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm6P62313 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Lsm6P62313 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm6P62313 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm6P62313 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Lsm6P62313 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.38□□□□□ -0.27
Lsm6P62313 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.38□□□□□ -0.27
Lsm6P62313 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.38□□□□□ -0.27
Lsm6P62313 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm6P62313 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm6P62313 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.38□□□□□ -0.27
Lsm6P62313 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm6P62313 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms