Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nphp4P59240 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nphp4P59240 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nphp4P59240 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nphp4P59240 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nphp4P59240 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nphp4P59240 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nphp4P59240 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nphp4P59240 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Nphp4P59240 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nphp4P59240 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC20.55■□□□□ 0.88
Nphp4P59240 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nphp4P59240 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC20.55■□□□□ 0.88
Nphp4P59240 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nphp4P59240 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nphp4P59240 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nphp4P59240 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC20.54■□□□□ 0.88
Nphp4P59240 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nphp4P59240 Ighv8-7-201ENSMUST00000194349 297 ntBASIC20.54■□□□□ 0.88
Nphp4P59240 AC158529.1-201ENSMUST00000223618 239 ntBASIC20.54■□□□□ 0.88
Nphp4P59240 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nphp4P59240 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nphp4P59240 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nphp4P59240 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nphp4P59240 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nphp4P59240 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nphp4P59240 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nphp4P59240 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nphp4P59240 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nphp4P59240 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nphp4P59240 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC20.54■□□□□ 0.88
Nphp4P59240 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nphp4P59240 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nphp4P59240 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nphp4P59240 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nphp4P59240 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nphp4P59240 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nphp4P59240 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nphp4P59240 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Nphp4P59240 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nphp4P59240 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nphp4P59240 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC20.53■□□□□ 0.88
Nphp4P59240 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Nphp4P59240 Gm27321-201ENSMUST00000185021 205 ntBASIC20.53■□□□□ 0.88
Nphp4P59240 Tcf21-202ENSMUST00000218002 1788 ntBASIC20.53■□□□□ 0.88
Nphp4P59240 AC133083.1-201ENSMUST00000221736 2209 ntBASIC20.53■□□□□ 0.88
Nphp4P59240 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nphp4P59240 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Nphp4P59240 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC20.53■□□□□ 0.88
Nphp4P59240 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nphp4P59240 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nphp4P59240 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nphp4P59240 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nphp4P59240 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Nphp4P59240 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
Nphp4P59240 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nphp4P59240 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Nphp4P59240 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nphp4P59240 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nphp4P59240 Gm6539-201ENSMUST00000119157 1064 ntBASIC20.53■□□□□ 0.88
Nphp4P59240 Gm25144-201ENSMUST00000179561 110 ntBASIC20.53■□□□□ 0.88
Nphp4P59240 Gm25352-201ENSMUST00000179815 110 ntBASIC20.53■□□□□ 0.88
Nphp4P59240 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nphp4P59240 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC20.53■□□□□ 0.88
Nphp4P59240 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Nphp4P59240 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nphp4P59240 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nphp4P59240 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nphp4P59240 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nphp4P59240 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nphp4P59240 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nphp4P59240 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Nphp4P59240 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nphp4P59240 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Nphp4P59240 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nphp4P59240 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.52■□□□□ 0.88
Nphp4P59240 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nphp4P59240 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nphp4P59240 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Nphp4P59240 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC20.52■□□□□ 0.87
Nphp4P59240 Gm13823-201ENSMUST00000119930 345 ntBASIC20.52■□□□□ 0.87
Nphp4P59240 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Nphp4P59240 Gm27306-201ENSMUST00000183970 107 ntBASIC20.52■□□□□ 0.87
Nphp4P59240 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC20.52■□□□□ 0.87
Nphp4P59240 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC20.52■□□□□ 0.87
Nphp4P59240 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nphp4P59240 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC20.52■□□□□ 0.87
Nphp4P59240 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Nphp4P59240 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC20.52■□□□□ 0.87
Nphp4P59240 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nphp4P59240 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nphp4P59240 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nphp4P59240 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nphp4P59240 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nphp4P59240 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nphp4P59240 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nphp4P59240 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Nphp4P59240 Gm27680-201ENSMUST00000184192 160 ntBASIC20.51■□□□□ 0.87
Nphp4P59240 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC20.51■□□□□ 0.87
Nphp4P59240 Gm30437-201ENSMUST00000206086 1201 ntBASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms