Protein–RNA interactions for Protein: P57080

Usp25, Ubiquitin carboxyl-terminal hydrolase 25, mousemouse

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp25P57080 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Usp25P57080 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Usp25P57080 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC17.32■□□□□ 0.36
Usp25P57080 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Usp25P57080 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp25P57080 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp25P57080 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp25P57080 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Usp25P57080 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Usp25P57080 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Usp25P57080 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Usp25P57080 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp25P57080 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.32■□□□□ 0.36
Usp25P57080 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp25P57080 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp25P57080 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp25P57080 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp25P57080 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp25P57080 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp25P57080 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Usp25P57080 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp25P57080 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp25P57080 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp25P57080 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Usp25P57080 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp25P57080 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Usp25P57080 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
Usp25P57080 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Usp25P57080 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Usp25P57080 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp25P57080 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp25P57080 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp25P57080 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp25P57080 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.31■□□□□ 0.36
Usp25P57080 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.31■□□□□ 0.36
Usp25P57080 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Usp25P57080 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Usp25P57080 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Usp25P57080 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.31■□□□□ 0.36
Usp25P57080 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.31■□□□□ 0.36
Usp25P57080 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.31■□□□□ 0.36
Usp25P57080 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Usp25P57080 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp25P57080 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp25P57080 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Usp25P57080 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
Usp25P57080 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.31■□□□□ 0.36
Usp25P57080 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Usp25P57080 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp25P57080 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp25P57080 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp25P57080 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp25P57080 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp25P57080 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp25P57080 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp25P57080 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Usp25P57080 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp25P57080 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp25P57080 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Usp25P57080 Mir770-201ENSMUST00000103252 94 ntBASIC17.3■□□□□ 0.36
Usp25P57080 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp25P57080 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp25P57080 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp25P57080 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp25P57080 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp25P57080 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp25P57080 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp25P57080 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp25P57080 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp25P57080 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp25P57080 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp25P57080 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Usp25P57080 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Usp25P57080 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp25P57080 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp25P57080 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp25P57080 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp25P57080 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp25P57080 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp25P57080 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp25P57080 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp25P57080 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC17.29■□□□□ 0.36
Usp25P57080 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Usp25P57080 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp25P57080 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Usp25P57080 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Usp25P57080 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp25P57080 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp25P57080 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp25P57080 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Usp25P57080 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Usp25P57080 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Usp25P57080 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Usp25P57080 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp25P57080 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Usp25P57080 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp25P57080 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.29■□□□□ 0.36
Usp25P57080 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp25P57080 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Usp25P57080 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms