Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SmoP56726 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SmoP56726 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SmoP56726 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SmoP56726 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SmoP56726 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SmoP56726 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SmoP56726 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SmoP56726 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.33■□□□□ 0.04
SmoP56726 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SmoP56726 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.33■□□□□ 0.04
SmoP56726 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SmoP56726 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SmoP56726 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
SmoP56726 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SmoP56726 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.33■□□□□ 0.04
SmoP56726 Thap2-203ENSMUST00000218989 527 ntBASIC15.33■□□□□ 0.04
SmoP56726 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
SmoP56726 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SmoP56726 Gm5867-201ENSMUST00000063197 592 ntBASIC15.33■□□□□ 0.04
SmoP56726 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SmoP56726 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.33■□□□□ 0.04
SmoP56726 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SmoP56726 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SmoP56726 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SmoP56726 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SmoP56726 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SmoP56726 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SmoP56726 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.33■□□□□ 0.04
SmoP56726 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SmoP56726 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SmoP56726 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SmoP56726 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SmoP56726 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SmoP56726 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SmoP56726 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SmoP56726 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SmoP56726 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SmoP56726 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SmoP56726 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SmoP56726 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SmoP56726 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SmoP56726 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.32■□□□□ 0.04
SmoP56726 Gm17271-201ENSMUST00000165535 355 ntBASIC15.32■□□□□ 0.04
SmoP56726 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SmoP56726 Gm24513-201ENSMUST00000174964 138 ntBASIC15.32■□□□□ 0.04
SmoP56726 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SmoP56726 Gm27301-201ENSMUST00000184012 127 ntBASIC15.32■□□□□ 0.04
SmoP56726 Gm27702-201ENSMUST00000184512 56 ntBASIC15.32■□□□□ 0.04
SmoP56726 Gm27397-201ENSMUST00000184997 107 ntBASIC15.32■□□□□ 0.04
SmoP56726 Gm2756-201ENSMUST00000195851 400 ntBASIC15.32■□□□□ 0.04
SmoP56726 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SmoP56726 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.32■□□□□ 0.04
SmoP56726 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SmoP56726 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SmoP56726 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SmoP56726 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.32■□□□□ 0.04
SmoP56726 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SmoP56726 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SmoP56726 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SmoP56726 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SmoP56726 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SmoP56726 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SmoP56726 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SmoP56726 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SmoP56726 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SmoP56726 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SmoP56726 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SmoP56726 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SmoP56726 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SmoP56726 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SmoP56726 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SmoP56726 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SmoP56726 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SmoP56726 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SmoP56726 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SmoP56726 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SmoP56726 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SmoP56726 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.31■□□□□ 0.04
SmoP56726 Gm16198-201ENSMUST00000118766 670 ntBASIC15.31■□□□□ 0.04
SmoP56726 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.31■□□□□ 0.04
SmoP56726 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SmoP56726 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SmoP56726 Gm2272-201ENSMUST00000194903 582 ntBASIC15.31■□□□□ 0.04
SmoP56726 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.31■□□□□ 0.04
SmoP56726 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SmoP56726 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SmoP56726 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SmoP56726 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SmoP56726 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SmoP56726 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.31■□□□□ 0.04
SmoP56726 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.31■□□□□ 0.04
SmoP56726 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.31■□□□□ 0.04
SmoP56726 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
SmoP56726 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SmoP56726 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SmoP56726 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SmoP56726 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SmoP56726 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SmoP56726 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms