Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab4aP56371 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab4aP56371 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab4aP56371 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Rab4aP56371 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.09□□□□□ -0.47
Rab4aP56371 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rab4aP56371 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab4aP56371 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab4aP56371 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab4aP56371 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.09□□□□□ -0.47
Rab4aP56371 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rab4aP56371 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab4aP56371 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab4aP56371 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Rab4aP56371 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rab4aP56371 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab4aP56371 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab4aP56371 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC12.09□□□□□ -0.47
Rab4aP56371 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rab4aP56371 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rab4aP56371 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rab4aP56371 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.09□□□□□ -0.47
Rab4aP56371 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC12.09□□□□□ -0.47
Rab4aP56371 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Rab4aP56371 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab4aP56371 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rab4aP56371 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab4aP56371 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.09□□□□□ -0.47
Rab4aP56371 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab4aP56371 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab4aP56371 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rab4aP56371 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab4aP56371 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab4aP56371 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rab4aP56371 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rab4aP56371 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Rab4aP56371 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rab4aP56371 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rab4aP56371 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Rab4aP56371 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rab4aP56371 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rab4aP56371 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rab4aP56371 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab4aP56371 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab4aP56371 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rab4aP56371 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab4aP56371 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rab4aP56371 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rab4aP56371 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Rab4aP56371 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab4aP56371 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab4aP56371 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Rab4aP56371 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rab4aP56371 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab4aP56371 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rab4aP56371 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab4aP56371 AC166341.7-201ENSMUST00000221698 126 ntBASIC12.08□□□□□ -0.48
Rab4aP56371 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.08□□□□□ -0.48
Rab4aP56371 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab4aP56371 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Rab4aP56371 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rab4aP56371 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rab4aP56371 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab4aP56371 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rab4aP56371 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rab4aP56371 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rab4aP56371 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.08□□□□□ -0.48
Rab4aP56371 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rab4aP56371 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab4aP56371 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab4aP56371 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab4aP56371 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab4aP56371 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab4aP56371 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rab4aP56371 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab4aP56371 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Rab4aP56371 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab4aP56371 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab4aP56371 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab4aP56371 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab4aP56371 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab4aP56371 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab4aP56371 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.07□□□□□ -0.48
Rab4aP56371 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rab4aP56371 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC12.07□□□□□ -0.48
Rab4aP56371 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rab4aP56371 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Rab4aP56371 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC12.07□□□□□ -0.48
Rab4aP56371 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC12.07□□□□□ -0.48
Rab4aP56371 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC12.07□□□□□ -0.48
Rab4aP56371 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab4aP56371 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab4aP56371 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Rab4aP56371 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab4aP56371 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab4aP56371 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rab4aP56371 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Rab4aP56371 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab4aP56371 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab4aP56371 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms