Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Cacnb3P54285 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cacnb3P54285 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cacnb3P54285 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cacnb3P54285 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Cacnb3P54285 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cacnb3P54285 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cacnb3P54285 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Cacnb3P54285 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cacnb3P54285 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacnb3P54285 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacnb3P54285 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Cacnb3P54285 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacnb3P54285 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cacnb3P54285 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.76■□□□□ 0.43
Cacnb3P54285 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacnb3P54285 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacnb3P54285 Gm12151-201ENSMUST00000121374 290 ntBASIC17.76■□□□□ 0.43
Cacnb3P54285 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacnb3P54285 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Cacnb3P54285 Gm16026-204ENSMUST00000162652 683 ntBASIC17.76■□□□□ 0.43
Cacnb3P54285 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.76■□□□□ 0.43
Cacnb3P54285 CT025535.1-201ENSMUST00000227172 491 ntBASIC17.76■□□□□ 0.43
Cacnb3P54285 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Cacnb3P54285 App-207ENSMUST00000227737 2827 ntBASIC17.76■□□□□ 0.43
Cacnb3P54285 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacnb3P54285 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.76■□□□□ 0.43
Cacnb3P54285 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacnb3P54285 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacnb3P54285 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacnb3P54285 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Cacnb3P54285 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Cacnb3P54285 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacnb3P54285 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacnb3P54285 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cacnb3P54285 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.75■□□□□ 0.43
Cacnb3P54285 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacnb3P54285 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.75■□□□□ 0.43
Cacnb3P54285 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacnb3P54285 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacnb3P54285 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cacnb3P54285 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cacnb3P54285 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacnb3P54285 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacnb3P54285 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacnb3P54285 Gm12428-201ENSMUST00000119844 727 ntBASIC17.75■□□□□ 0.43
Cacnb3P54285 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.75■□□□□ 0.43
Cacnb3P54285 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC17.75■□□□□ 0.43
Cacnb3P54285 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.75■□□□□ 0.43
Cacnb3P54285 Gm27618-201ENSMUST00000183671 60 ntBASIC17.75■□□□□ 0.43
Cacnb3P54285 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cacnb3P54285 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacnb3P54285 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacnb3P54285 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.75■□□□□ 0.43
Cacnb3P54285 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacnb3P54285 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacnb3P54285 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cacnb3P54285 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cacnb3P54285 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Cacnb3P54285 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cacnb3P54285 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.75■□□□□ 0.43
Cacnb3P54285 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cacnb3P54285 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cacnb3P54285 AC159621.2-201ENSMUST00000223519 1326 ntBASIC17.74■□□□□ 0.43
Cacnb3P54285 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cacnb3P54285 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cacnb3P54285 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.74■□□□□ 0.43
Cacnb3P54285 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Cacnb3P54285 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Cacnb3P54285 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Cacnb3P54285 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cacnb3P54285 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cacnb3P54285 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.74■□□□□ 0.43
Cacnb3P54285 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.74■□□□□ 0.43
Cacnb3P54285 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cacnb3P54285 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cacnb3P54285 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.74■□□□□ 0.43
Cacnb3P54285 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cacnb3P54285 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC17.74■□□□□ 0.43
Cacnb3P54285 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cacnb3P54285 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cacnb3P54285 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cacnb3P54285 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.74■□□□□ 0.43
Cacnb3P54285 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cacnb3P54285 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.74■□□□□ 0.43
Cacnb3P54285 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cacnb3P54285 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.74■□□□□ 0.43
Cacnb3P54285 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cacnb3P54285 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cacnb3P54285 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cacnb3P54285 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
Cacnb3P54285 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cacnb3P54285 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cacnb3P54285 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cacnb3P54285 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cacnb3P54285 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cacnb3P54285 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cacnb3P54285 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC17.73■□□□□ 0.43
Cacnb3P54285 Gm6415-201ENSMUST00000118488 348 ntBASIC17.73■□□□□ 0.43
Cacnb3P54285 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms