Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdx1P52946 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Pdx1P52946 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdx1P52946 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.12■□□□□ 0.01
Pdx1P52946 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.12■□□□□ 0.01
Pdx1P52946 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.12■□□□□ 0.01
Pdx1P52946 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdx1P52946 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Pdx1P52946 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pdx1P52946 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdx1P52946 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.12■□□□□ 0.01
Pdx1P52946 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdx1P52946 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdx1P52946 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Pdx1P52946 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdx1P52946 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdx1P52946 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Pdx1P52946 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdx1P52946 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdx1P52946 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pdx1P52946 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdx1P52946 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.11■□□□□ 0.01
Pdx1P52946 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.11■□□□□ 0.01
Pdx1P52946 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdx1P52946 Gm18733-201ENSMUST00000173950 856 ntBASIC15.11■□□□□ 0.01
Pdx1P52946 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pdx1P52946 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.11■□□□□ 0.01
Pdx1P52946 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pdx1P52946 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pdx1P52946 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdx1P52946 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pdx1P52946 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdx1P52946 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdx1P52946 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdx1P52946 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdx1P52946 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdx1P52946 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdx1P52946 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdx1P52946 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pdx1P52946 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pdx1P52946 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Pdx1P52946 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdx1P52946 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdx1P52946 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Pdx1P52946 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdx1P52946 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pdx1P52946 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Pdx1P52946 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.1■□□□□ 0.01
Pdx1P52946 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pdx1P52946 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.1■□□□□ 0.01
Pdx1P52946 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.1■□□□□ 0.01
Pdx1P52946 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.1■□□□□ 0.01
Pdx1P52946 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pdx1P52946 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Pdx1P52946 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Pdx1P52946 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdx1P52946 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Pdx1P52946 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.1■□□□□ 0.01
Pdx1P52946 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdx1P52946 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdx1P52946 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pdx1P52946 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.1■□□□□ 0.01
Pdx1P52946 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdx1P52946 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdx1P52946 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Pdx1P52946 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pdx1P52946 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pdx1P52946 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdx1P52946 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.09■□□□□ 0.01
Pdx1P52946 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pdx1P52946 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdx1P52946 Sybu-209ENSMUST00000228639 4113 ntBASIC15.09■□□□□ 0.01
Pdx1P52946 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdx1P52946 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdx1P52946 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdx1P52946 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdx1P52946 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.09■□□□□ 0.01
Pdx1P52946 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pdx1P52946 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdx1P52946 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.09■□□□□ 0.01
Pdx1P52946 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Pdx1P52946 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pdx1P52946 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdx1P52946 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdx1P52946 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdx1P52946 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdx1P52946 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.09■□□□□ 0.01
Pdx1P52946 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pdx1P52946 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdx1P52946 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Pdx1P52946 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Pdx1P52946 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdx1P52946 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pdx1P52946 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pdx1P52946 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Pdx1P52946 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pdx1P52946 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pdx1P52946 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Pdx1P52946 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pdx1P52946 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms