Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC13.01□□□□□ -0.33
Hmga2P52927 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.01□□□□□ -0.33
Hmga2P52927 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hmga2P52927 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmga2P52927 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmga2P52927 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmga2P52927 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmga2P52927 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hmga2P52927 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.01□□□□□ -0.33
Hmga2P52927 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Hmga2P52927 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hmga2P52927 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Hmga2P52927 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmga2P52927 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.01□□□□□ -0.33
Hmga2P52927 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Hmga2P52927 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Hmga2P52927 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmga2P52927 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Hmga2P52927 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmga2P52927 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmga2P52927 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmga2P52927 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmga2P52927 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Hmga2P52927 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hmga2P52927 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Hmga2P52927 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmga2P52927 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Hmga2P52927 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Hmga2P52927 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Hmga2P52927 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13□□□□□ -0.33
Hmga2P52927 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmga2P52927 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Hmga2P52927 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Hmga2P52927 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hmga2P52927 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13□□□□□ -0.33
Hmga2P52927 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmga2P52927 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmga2P52927 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Hmga2P52927 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmga2P52927 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Hmga2P52927 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hmga2P52927 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13□□□□□ -0.33
Hmga2P52927 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmga2P52927 Gm19164-201ENSMUST00000210667 640 ntBASIC13□□□□□ -0.33
Hmga2P52927 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmga2P52927 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Hmga2P52927 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13□□□□□ -0.33
Hmga2P52927 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Hmga2P52927 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmga2P52927 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmga2P52927 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hmga2P52927 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hmga2P52927 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmga2P52927 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmga2P52927 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Hmga2P52927 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmga2P52927 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
Hmga2P52927 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmga2P52927 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmga2P52927 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmga2P52927 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.99□□□□□ -0.33
Hmga2P52927 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Hmga2P52927 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmga2P52927 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hmga2P52927 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hmga2P52927 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hmga2P52927 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.99□□□□□ -0.33
Hmga2P52927 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Hmga2P52927 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hmga2P52927 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hmga2P52927 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hmga2P52927 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hmga2P52927 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hmga2P52927 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.99□□□□□ -0.33
Hmga2P52927 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hmga2P52927 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmga2P52927 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmga2P52927 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmga2P52927 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmga2P52927 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hmga2P52927 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Hmga2P52927 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmga2P52927 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmga2P52927 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmga2P52927 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmga2P52927 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmga2P52927 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hmga2P52927 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Hmga2P52927 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hmga2P52927 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hmga2P52927 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Hmga2P52927 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.99□□□□□ -0.33
Hmga2P52927 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmga2P52927 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmga2P52927 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hmga2P52927 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hmga2P52927 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmga2P52927 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.98□□□□□ -0.33
Hmga2P52927 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hmga2P52927 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms