Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Sox2P48432 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox2P48432 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox2P48432 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox2P48432 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Sox2P48432 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox2P48432 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox2P48432 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Sox2P48432 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Sox2P48432 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox2P48432 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox2P48432 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox2P48432 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox2P48432 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox2P48432 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox2P48432 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox2P48432 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox2P48432 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sox2P48432 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Sox2P48432 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sox2P48432 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox2P48432 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.34□□□□□ -0.11
Sox2P48432 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.34□□□□□ -0.11
Sox2P48432 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.34□□□□□ -0.11
Sox2P48432 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox2P48432 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.34□□□□□ -0.11
Sox2P48432 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sox2P48432 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.34□□□□□ -0.11
Sox2P48432 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox2P48432 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sox2P48432 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Sox2P48432 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox2P48432 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox2P48432 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox2P48432 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox2P48432 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox2P48432 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox2P48432 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sox2P48432 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sox2P48432 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox2P48432 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sox2P48432 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.34□□□□□ -0.11
Sox2P48432 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox2P48432 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox2P48432 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Sox2P48432 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.34□□□□□ -0.11
Sox2P48432 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Sox2P48432 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox2P48432 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox2P48432 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sox2P48432 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sox2P48432 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sox2P48432 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Sox2P48432 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Sox2P48432 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sox2P48432 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sox2P48432 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sox2P48432 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sox2P48432 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sox2P48432 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox2P48432 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox2P48432 Grk6-207ENSMUST00000225925 2769 ntBASIC14.33□□□□□ -0.12
Sox2P48432 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sox2P48432 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sox2P48432 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sox2P48432 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox2P48432 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Sox2P48432 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox2P48432 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox2P48432 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox2P48432 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox2P48432 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sox2P48432 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox2P48432 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox2P48432 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox2P48432 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox2P48432 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox2P48432 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.32□□□□□ -0.12
Sox2P48432 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox2P48432 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sox2P48432 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.32□□□□□ -0.12
Sox2P48432 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox2P48432 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox2P48432 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox2P48432 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox2P48432 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox2P48432 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox2P48432 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Sox2P48432 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox2P48432 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox2P48432 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.32□□□□□ -0.12
Sox2P48432 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sox2P48432 Gm6623-201ENSMUST00000173570 544 ntBASIC14.32□□□□□ -0.12
Sox2P48432 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Sox2P48432 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sox2P48432 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox2P48432 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.32□□□□□ -0.12
Sox2P48432 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.32□□□□□ -0.12
Sox2P48432 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.32□□□□□ -0.12
Sox2P48432 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms