Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps4bP46467 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps4bP46467 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Vps4bP46467 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Vps4bP46467 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Vps4bP46467 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps4bP46467 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Vps4bP46467 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.51■□□□□ 0.07
Vps4bP46467 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.51■□□□□ 0.07
Vps4bP46467 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps4bP46467 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Vps4bP46467 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.51■□□□□ 0.07
Vps4bP46467 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.51■□□□□ 0.07
Vps4bP46467 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.51■□□□□ 0.07
Vps4bP46467 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps4bP46467 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.51■□□□□ 0.07
Vps4bP46467 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps4bP46467 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Vps4bP46467 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Vps4bP46467 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps4bP46467 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.51■□□□□ 0.07
Vps4bP46467 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Vps4bP46467 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps4bP46467 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps4bP46467 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps4bP46467 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps4bP46467 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps4bP46467 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps4bP46467 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Vps4bP46467 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps4bP46467 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps4bP46467 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Vps4bP46467 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.51■□□□□ 0.07
Vps4bP46467 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps4bP46467 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.5■□□□□ 0.07
Vps4bP46467 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.5■□□□□ 0.07
Vps4bP46467 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps4bP46467 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps4bP46467 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps4bP46467 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps4bP46467 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps4bP46467 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps4bP46467 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.5■□□□□ 0.07
Vps4bP46467 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Vps4bP46467 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps4bP46467 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Vps4bP46467 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Vps4bP46467 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.5■□□□□ 0.07
Vps4bP46467 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.5■□□□□ 0.07
Vps4bP46467 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.5■□□□□ 0.07
Vps4bP46467 Gm28659-201ENSMUST00000188013 759 ntBASIC15.5■□□□□ 0.07
Vps4bP46467 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.5■□□□□ 0.07
Vps4bP46467 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.5■□□□□ 0.07
Vps4bP46467 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps4bP46467 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps4bP46467 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps4bP46467 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps4bP46467 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps4bP46467 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Vps4bP46467 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Vps4bP46467 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Vps4bP46467 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps4bP46467 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps4bP46467 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps4bP46467 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps4bP46467 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps4bP46467 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps4bP46467 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps4bP46467 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps4bP46467 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Vps4bP46467 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.49■□□□□ 0.07
Vps4bP46467 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Vps4bP46467 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Vps4bP46467 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Vps4bP46467 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.49■□□□□ 0.07
Vps4bP46467 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps4bP46467 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Vps4bP46467 Gm7506-201ENSMUST00000207758 815 ntBASIC15.49■□□□□ 0.07
Vps4bP46467 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps4bP46467 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.49■□□□□ 0.07
Vps4bP46467 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps4bP46467 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps4bP46467 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps4bP46467 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Vps4bP46467 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Vps4bP46467 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps4bP46467 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps4bP46467 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Vps4bP46467 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps4bP46467 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps4bP46467 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps4bP46467 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps4bP46467 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps4bP46467 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.48■□□□□ 0.07
Vps4bP46467 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.48■□□□□ 0.07
Vps4bP46467 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.48■□□□□ 0.07
Vps4bP46467 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.48■□□□□ 0.07
Vps4bP46467 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
Vps4bP46467 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Vps4bP46467 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms