Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdx2P43241 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdx2P43241 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Cdx2P43241 Gm2423-201ENSMUST00000074863 733 ntBASIC14.46□□□□□ -0.09
Cdx2P43241 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdx2P43241 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdx2P43241 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdx2P43241 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdx2P43241 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdx2P43241 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdx2P43241 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.46□□□□□ -0.09
Cdx2P43241 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Cdx2P43241 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdx2P43241 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdx2P43241 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdx2P43241 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdx2P43241 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Cdx2P43241 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.45□□□□□ -0.1
Cdx2P43241 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Cdx2P43241 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdx2P43241 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdx2P43241 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cdx2P43241 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.45□□□□□ -0.1
Cdx2P43241 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.45□□□□□ -0.1
Cdx2P43241 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.45□□□□□ -0.1
Cdx2P43241 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Cdx2P43241 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Cdx2P43241 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdx2P43241 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdx2P43241 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.45□□□□□ -0.1
Cdx2P43241 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdx2P43241 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdx2P43241 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdx2P43241 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Cdx2P43241 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdx2P43241 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdx2P43241 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdx2P43241 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx2P43241 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx2P43241 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx2P43241 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx2P43241 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx2P43241 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx2P43241 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx2P43241 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx2P43241 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx2P43241 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cdx2P43241 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx2P43241 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
Cdx2P43241 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx2P43241 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx2P43241 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx2P43241 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Cdx2P43241 Mir7684-201ENSMUST00000183858 60 ntBASIC14.44□□□□□ -0.1
Cdx2P43241 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cdx2P43241 Gm29541-201ENSMUST00000191351 678 ntBASIC14.44□□□□□ -0.1
Cdx2P43241 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx2P43241 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.44□□□□□ -0.1
Cdx2P43241 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx2P43241 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx2P43241 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx2P43241 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cdx2P43241 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx2P43241 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx2P43241 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx2P43241 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx2P43241 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx2P43241 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cdx2P43241 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx2P43241 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx2P43241 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx2P43241 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdx2P43241 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx2P43241 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx2P43241 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx2P43241 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx2P43241 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx2P43241 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx2P43241 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx2P43241 Gm13015-201ENSMUST00000118674 204 ntBASIC14.43□□□□□ -0.1
Cdx2P43241 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx2P43241 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx2P43241 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx2P43241 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx2P43241 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.43□□□□□ -0.1
Cdx2P43241 Gm18049-201ENSMUST00000208909 581 ntBASIC14.43□□□□□ -0.1
Cdx2P43241 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.43□□□□□ -0.1
Cdx2P43241 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx2P43241 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx2P43241 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx2P43241 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx2P43241 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.43□□□□□ -0.1
Cdx2P43241 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx2P43241 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx2P43241 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx2P43241 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdx2P43241 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdx2P43241 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdx2P43241 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdx2P43241 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms