Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
HttP42859 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HttP42859 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
HttP42859 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
HttP42859 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
HttP42859 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HttP42859 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HttP42859 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HttP42859 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC16.08■□□□□ 0.16
HttP42859 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HttP42859 Gm44799-201ENSMUST00000207639 1202 ntBASIC16.08■□□□□ 0.16
HttP42859 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.08■□□□□ 0.16
HttP42859 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HttP42859 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HttP42859 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HttP42859 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HttP42859 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
HttP42859 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HttP42859 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HttP42859 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HttP42859 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HttP42859 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
HttP42859 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HttP42859 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HttP42859 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HttP42859 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
HttP42859 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HttP42859 Gm12341-201ENSMUST00000119724 503 ntBASIC16.07■□□□□ 0.16
HttP42859 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.07■□□□□ 0.16
HttP42859 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HttP42859 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HttP42859 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HttP42859 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HttP42859 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
HttP42859 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
HttP42859 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.06■□□□□ 0.16
HttP42859 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HttP42859 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HttP42859 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC16.06■□□□□ 0.16
HttP42859 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HttP42859 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HttP42859 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
HttP42859 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
HttP42859 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HttP42859 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.06■□□□□ 0.16
HttP42859 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HttP42859 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HttP42859 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
HttP42859 AC159747.1-201ENSMUST00000219903 265 ntBASIC16.06■□□□□ 0.16
HttP42859 Gm9229-201ENSMUST00000222777 126 ntBASIC16.06■□□□□ 0.16
HttP42859 AC150560.1-201ENSMUST00000227731 1187 ntBASIC16.06■□□□□ 0.16
HttP42859 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.06■□□□□ 0.16
HttP42859 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
HttP42859 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.06■□□□□ 0.16
HttP42859 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HttP42859 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HttP42859 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HttP42859 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HttP42859 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
HttP42859 Gm29310-201ENSMUST00000185468 696 ntBASIC16.05■□□□□ 0.16
HttP42859 Gm21825-201ENSMUST00000185728 696 ntBASIC16.05■□□□□ 0.16
HttP42859 Gm29109-201ENSMUST00000185895 696 ntBASIC16.05■□□□□ 0.16
HttP42859 Gm21896-201ENSMUST00000186520 696 ntBASIC16.05■□□□□ 0.16
HttP42859 Gm21873-201ENSMUST00000186728 696 ntBASIC16.05■□□□□ 0.16
HttP42859 Gm21794-201ENSMUST00000187056 696 ntBASIC16.05■□□□□ 0.16
HttP42859 Gm21880-201ENSMUST00000187275 696 ntBASIC16.05■□□□□ 0.16
HttP42859 Gm21826-201ENSMUST00000187451 696 ntBASIC16.05■□□□□ 0.16
HttP42859 Gm29127-201ENSMUST00000188304 517 ntBASIC16.05■□□□□ 0.16
HttP42859 Gm21198-201ENSMUST00000188393 696 ntBASIC16.05■□□□□ 0.16
HttP42859 Gm21749-201ENSMUST00000189343 696 ntBASIC16.05■□□□□ 0.16
HttP42859 Gm21901-201ENSMUST00000189568 696 ntBASIC16.05■□□□□ 0.16
HttP42859 Gm29424-201ENSMUST00000189716 696 ntBASIC16.05■□□□□ 0.16
HttP42859 Gm28599-201ENSMUST00000189838 694 ntBASIC16.05■□□□□ 0.16
HttP42859 Gm21867-201ENSMUST00000189917 696 ntBASIC16.05■□□□□ 0.16
HttP42859 Gm29269-201ENSMUST00000190087 696 ntBASIC16.05■□□□□ 0.16
HttP42859 Gm21722-201ENSMUST00000190153 696 ntBASIC16.05■□□□□ 0.16
HttP42859 Gm28423-201ENSMUST00000190701 696 ntBASIC16.05■□□□□ 0.16
HttP42859 Gm21899-201ENSMUST00000190745 696 ntBASIC16.05■□□□□ 0.16
HttP42859 Gm21910-201ENSMUST00000191163 696 ntBASIC16.05■□□□□ 0.16
HttP42859 Gm21849-201ENSMUST00000191571 696 ntBASIC16.05■□□□□ 0.16
HttP42859 Gm28678-201ENSMUST00000191593 696 ntBASIC16.05■□□□□ 0.16
HttP42859 Gm20910-201ENSMUST00000193268 696 ntBASIC16.05■□□□□ 0.16
HttP42859 Gm21871-201ENSMUST00000194621 696 ntBASIC16.05■□□□□ 0.16
HttP42859 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HttP42859 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HttP42859 AC155286.1-201ENSMUST00000218632 448 ntBASIC16.05■□□□□ 0.16
HttP42859 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HttP42859 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HttP42859 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
HttP42859 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HttP42859 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HttP42859 AC140451.2-201ENSMUST00000228030 664 ntBASIC16.05■□□□□ 0.16
HttP42859 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HttP42859 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HttP42859 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HttP42859 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HttP42859 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.05■□□□□ 0.16
HttP42859 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HttP42859 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HttP42859 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms