Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox6P40645 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.39□□□□□ -0.11
Sox6P40645 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sox6P40645 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox6P40645 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Sox6P40645 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox6P40645 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox6P40645 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sox6P40645 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox6P40645 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sox6P40645 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox6P40645 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.38□□□□□ -0.11
Sox6P40645 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox6P40645 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sox6P40645 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox6P40645 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Sox6P40645 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox6P40645 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Sox6P40645 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox6P40645 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox6P40645 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Sox6P40645 Ank2-226ENSMUST00000189368 339 ntBASIC14.38□□□□□ -0.11
Sox6P40645 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sox6P40645 Gm18669-201ENSMUST00000216049 778 ntBASIC14.38□□□□□ -0.11
Sox6P40645 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sox6P40645 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sox6P40645 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sox6P40645 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Sox6P40645 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sox6P40645 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox6P40645 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.38□□□□□ -0.11
Sox6P40645 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox6P40645 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox6P40645 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sox6P40645 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Sox6P40645 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sox6P40645 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.37□□□□□ -0.11
Sox6P40645 BC037039-201ENSMUST00000192003 2205 ntBASIC14.37□□□□□ -0.11
Sox6P40645 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox6P40645 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.37□□□□□ -0.11
Sox6P40645 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox6P40645 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox6P40645 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.37□□□□□ -0.11
Sox6P40645 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox6P40645 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.37□□□□□ -0.11
Sox6P40645 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.37□□□□□ -0.11
Sox6P40645 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox6P40645 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox6P40645 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox6P40645 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox6P40645 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sox6P40645 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sox6P40645 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox6P40645 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox6P40645 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox6P40645 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox6P40645 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox6P40645 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.36□□□□□ -0.11
Sox6P40645 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sox6P40645 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox6P40645 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox6P40645 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox6P40645 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox6P40645 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox6P40645 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sox6P40645 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox6P40645 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sox6P40645 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.36□□□□□ -0.11
Sox6P40645 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.36□□□□□ -0.11
Sox6P40645 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.36□□□□□ -0.11
Sox6P40645 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox6P40645 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sox6P40645 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Sox6P40645 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox6P40645 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox6P40645 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox6P40645 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sox6P40645 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox6P40645 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox6P40645 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.36□□□□□ -0.11
Sox6P40645 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox6P40645 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sox6P40645 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox6P40645 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Sox6P40645 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox6P40645 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox6P40645 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox6P40645 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox6P40645 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox6P40645 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox6P40645 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Sox6P40645 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sox6P40645 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sox6P40645 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox6P40645 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox6P40645 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Sox6P40645 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox6P40645 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox6P40645 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sox6P40645 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms