Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Foxa1P35582 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxa1P35582 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxa1P35582 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.13□□□□□ -0.15
Foxa1P35582 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxa1P35582 Gm10499-201ENSMUST00000174094 934 ntBASIC14.13□□□□□ -0.15
Foxa1P35582 Gm27628-201ENSMUST00000184911 107 ntBASIC14.13□□□□□ -0.15
Foxa1P35582 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.13□□□□□ -0.15
Foxa1P35582 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.13□□□□□ -0.15
Foxa1P35582 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Foxa1P35582 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Foxa1P35582 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Foxa1P35582 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxa1P35582 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxa1P35582 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxa1P35582 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Foxa1P35582 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Foxa1P35582 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.13□□□□□ -0.15
Foxa1P35582 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Foxa1P35582 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.13□□□□□ -0.15
Foxa1P35582 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxa1P35582 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxa1P35582 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Foxa1P35582 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.12□□□□□ -0.15
Foxa1P35582 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Foxa1P35582 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxa1P35582 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxa1P35582 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxa1P35582 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Foxa1P35582 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxa1P35582 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxa1P35582 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxa1P35582 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Foxa1P35582 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Foxa1P35582 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxa1P35582 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Foxa1P35582 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Foxa1P35582 Gm4899-201ENSMUST00000178708 719 ntBASIC14.12□□□□□ -0.15
Foxa1P35582 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Foxa1P35582 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.12□□□□□ -0.15
Foxa1P35582 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Foxa1P35582 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxa1P35582 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Foxa1P35582 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxa1P35582 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxa1P35582 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Foxa1P35582 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.12□□□□□ -0.15
Foxa1P35582 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxa1P35582 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Foxa1P35582 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Foxa1P35582 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Foxa1P35582 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Foxa1P35582 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Foxa1P35582 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Foxa1P35582 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Foxa1P35582 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Foxa1P35582 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Foxa1P35582 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Foxa1P35582 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Foxa1P35582 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.11□□□□□ -0.15
Foxa1P35582 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Foxa1P35582 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.11□□□□□ -0.15
Foxa1P35582 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.11□□□□□ -0.15
Foxa1P35582 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Foxa1P35582 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.11□□□□□ -0.15
Foxa1P35582 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.11□□□□□ -0.15
Foxa1P35582 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.11□□□□□ -0.15
Foxa1P35582 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Foxa1P35582 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Foxa1P35582 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Foxa1P35582 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Foxa1P35582 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Foxa1P35582 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Foxa1P35582 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Foxa1P35582 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Foxa1P35582 BC037039-201ENSMUST00000192003 2205 ntBASIC14.11□□□□□ -0.15
Foxa1P35582 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Foxa1P35582 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Foxa1P35582 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Foxa1P35582 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Foxa1P35582 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Foxa1P35582 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Foxa1P35582 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Foxa1P35582 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Foxa1P35582 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Foxa1P35582 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Foxa1P35582 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Foxa1P35582 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Foxa1P35582 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Foxa1P35582 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Foxa1P35582 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Foxa1P35582 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Foxa1P35582 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.1□□□□□ -0.15
Foxa1P35582 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.1□□□□□ -0.15
Foxa1P35582 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Foxa1P35582 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Foxa1P35582 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Foxa1P35582 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.1□□□□□ -0.15
Foxa1P35582 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
Foxa1P35582 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms