Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col8a2P25318 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col8a2P25318 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.75□□□□□ -0.37
Col8a2P25318 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Col8a2P25318 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Col8a2P25318 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col8a2P25318 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col8a2P25318 Gm23935-201ENSMUST00000102303 57 ntBASIC12.75□□□□□ -0.37
Col8a2P25318 Gm24270-201ENSMUST00000102326 57 ntBASIC12.75□□□□□ -0.37
Col8a2P25318 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col8a2P25318 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Col8a2P25318 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.75□□□□□ -0.37
Col8a2P25318 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col8a2P25318 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col8a2P25318 Gm9385-201ENSMUST00000117563 472 ntBASIC12.75□□□□□ -0.37
Col8a2P25318 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col8a2P25318 Gm24245-201ENSMUST00000157318 57 ntBASIC12.75□□□□□ -0.37
Col8a2P25318 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col8a2P25318 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col8a2P25318 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Col8a2P25318 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Col8a2P25318 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.75□□□□□ -0.37
Col8a2P25318 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.75□□□□□ -0.37
Col8a2P25318 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.75□□□□□ -0.37
Col8a2P25318 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col8a2P25318 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col8a2P25318 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col8a2P25318 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col8a2P25318 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col8a2P25318 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col8a2P25318 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col8a2P25318 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col8a2P25318 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Col8a2P25318 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col8a2P25318 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Col8a2P25318 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col8a2P25318 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Col8a2P25318 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col8a2P25318 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.74□□□□□ -0.37
Col8a2P25318 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col8a2P25318 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Col8a2P25318 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col8a2P25318 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col8a2P25318 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Col8a2P25318 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col8a2P25318 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Col8a2P25318 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Col8a2P25318 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.74□□□□□ -0.37
Col8a2P25318 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Col8a2P25318 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Col8a2P25318 Gm5177-201ENSMUST00000183092 997 ntBASIC12.74□□□□□ -0.37
Col8a2P25318 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col8a2P25318 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Col8a2P25318 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.74□□□□□ -0.37
Col8a2P25318 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col8a2P25318 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col8a2P25318 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col8a2P25318 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col8a2P25318 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col8a2P25318 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col8a2P25318 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col8a2P25318 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col8a2P25318 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Col8a2P25318 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col8a2P25318 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col8a2P25318 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col8a2P25318 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col8a2P25318 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col8a2P25318 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col8a2P25318 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col8a2P25318 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col8a2P25318 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Col8a2P25318 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
Col8a2P25318 BC037039-201ENSMUST00000192003 2205 ntBASIC12.73□□□□□ -0.37
Col8a2P25318 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Col8a2P25318 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.73□□□□□ -0.37
Col8a2P25318 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col8a2P25318 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col8a2P25318 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col8a2P25318 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Col8a2P25318 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col8a2P25318 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col8a2P25318 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.73□□□□□ -0.37
Col8a2P25318 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col8a2P25318 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Col8a2P25318 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col8a2P25318 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Col8a2P25318 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col8a2P25318 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.73□□□□□ -0.37
Col8a2P25318 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col8a2P25318 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col8a2P25318 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col8a2P25318 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col8a2P25318 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col8a2P25318 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col8a2P25318 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col8a2P25318 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col8a2P25318 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Col8a2P25318 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col8a2P25318 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms