Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.64□□□□□ -0.55
Fn1P11276 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Fn1P11276 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Fn1P11276 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Fn1P11276 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Fn1P11276 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Fn1P11276 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Fn1P11276 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Fn1P11276 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.64□□□□□ -0.55
Fn1P11276 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Fn1P11276 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Fn1P11276 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Fn1P11276 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Fn1P11276 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Fn1P11276 Gm45774-201ENSMUST00000211992 2665 ntBASIC11.64□□□□□ -0.55
Fn1P11276 Gm23931-201ENSMUST00000103842 109 ntBASIC11.64□□□□□ -0.55
Fn1P11276 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.64□□□□□ -0.55
Fn1P11276 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Fn1P11276 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Fn1P11276 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Fn1P11276 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Fn1P11276 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.64□□□□□ -0.55
Fn1P11276 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Fn1P11276 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Fn1P11276 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Fn1P11276 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.64□□□□□ -0.55
Fn1P11276 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Fn1P11276 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fn1P11276 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC11.63□□□□□ -0.55
Fn1P11276 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Fn1P11276 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fn1P11276 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fn1P11276 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Fn1P11276 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fn1P11276 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC11.63□□□□□ -0.55
Fn1P11276 Gm6244-201ENSMUST00000178732 841 ntBASIC11.63□□□□□ -0.55
Fn1P11276 Gm18056-201ENSMUST00000207670 568 ntBASIC11.63□□□□□ -0.55
Fn1P11276 Gm18061-201ENSMUST00000208350 562 ntBASIC11.63□□□□□ -0.55
Fn1P11276 Gm18063-201ENSMUST00000208529 568 ntBASIC11.63□□□□□ -0.55
Fn1P11276 Gm18052-201ENSMUST00000208750 559 ntBASIC11.63□□□□□ -0.55
Fn1P11276 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fn1P11276 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fn1P11276 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC11.63□□□□□ -0.55
Fn1P11276 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fn1P11276 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC11.63□□□□□ -0.55
Fn1P11276 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fn1P11276 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fn1P11276 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC11.63□□□□□ -0.55
Fn1P11276 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Fn1P11276 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fn1P11276 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC11.63□□□□□ -0.55
Fn1P11276 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fn1P11276 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Fn1P11276 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Fn1P11276 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Fn1P11276 Gm27243-201ENSMUST00000183964 521 ntBASIC11.63□□□□□ -0.55
Fn1P11276 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Fn1P11276 Gm37466-201ENSMUST00000195692 652 ntBASIC11.63□□□□□ -0.55
Fn1P11276 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fn1P11276 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Fn1P11276 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Fn1P11276 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fn1P11276 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fn1P11276 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Fn1P11276 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.62□□□□□ -0.55
Fn1P11276 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fn1P11276 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fn1P11276 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fn1P11276 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fn1P11276 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fn1P11276 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC11.62□□□□□ -0.55
Fn1P11276 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC11.62□□□□□ -0.55
Fn1P11276 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fn1P11276 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Fn1P11276 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Fn1P11276 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Fn1P11276 Gm12341-201ENSMUST00000119724 503 ntBASIC11.62□□□□□ -0.55
Fn1P11276 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.62□□□□□ -0.55
Fn1P11276 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC11.62□□□□□ -0.55
Fn1P11276 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.62□□□□□ -0.55
Fn1P11276 AA619741-201ENSMUST00000195095 646 ntBASIC11.62□□□□□ -0.55
Fn1P11276 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC11.62□□□□□ -0.55
Fn1P11276 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fn1P11276 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Fn1P11276 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fn1P11276 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fn1P11276 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fn1P11276 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fn1P11276 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fn1P11276 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fn1P11276 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Fn1P11276 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC11.62□□□□□ -0.55
Fn1P11276 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Fn1P11276 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Fn1P11276 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fn1P11276 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Fn1P11276 Gm36858-201ENSMUST00000194501 2391 ntBASIC11.62□□□□□ -0.55
Fn1P11276 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Fn1P11276 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Fn1P11276 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms