Protein–RNA interactions for Protein: P10287

Cdh3, Cadherin-3, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh3P10287 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh3P10287 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh3P10287 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh3P10287 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh3P10287 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh3P10287 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.18□□□□□ -0.14
Cdh3P10287 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
Cdh3P10287 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cdh3P10287 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh3P10287 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh3P10287 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh3P10287 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh3P10287 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh3P10287 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh3P10287 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh3P10287 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh3P10287 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh3P10287 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh3P10287 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh3P10287 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh3P10287 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh3P10287 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh3P10287 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Cdh3P10287 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh3P10287 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh3P10287 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh3P10287 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh3P10287 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh3P10287 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh3P10287 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh3P10287 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh3P10287 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh3P10287 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh3P10287 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh3P10287 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh3P10287 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh3P10287 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh3P10287 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh3P10287 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cdh3P10287 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh3P10287 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cdh3P10287 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.17□□□□□ -0.14
Cdh3P10287 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.17□□□□□ -0.14
Cdh3P10287 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cdh3P10287 Gm27357-201ENSMUST00000183754 135 ntBASIC14.17□□□□□ -0.14
Cdh3P10287 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.17□□□□□ -0.14
Cdh3P10287 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh3P10287 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh3P10287 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh3P10287 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Cdh3P10287 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cdh3P10287 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh3P10287 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh3P10287 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh3P10287 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Cdh3P10287 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdh3P10287 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.17□□□□□ -0.14
Cdh3P10287 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Cdh3P10287 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.16□□□□□ -0.14
Cdh3P10287 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh3P10287 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh3P10287 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh3P10287 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh3P10287 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh3P10287 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh3P10287 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Cdh3P10287 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.16□□□□□ -0.14
Cdh3P10287 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh3P10287 Gm9103-201ENSMUST00000119371 405 ntBASIC14.16□□□□□ -0.14
Cdh3P10287 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.16□□□□□ -0.14
Cdh3P10287 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh3P10287 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cdh3P10287 Gm18669-201ENSMUST00000216049 778 ntBASIC14.16□□□□□ -0.14
Cdh3P10287 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh3P10287 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh3P10287 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh3P10287 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh3P10287 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cdh3P10287 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh3P10287 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cdh3P10287 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.16□□□□□ -0.14
Cdh3P10287 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh3P10287 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh3P10287 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh3P10287 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh3P10287 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh3P10287 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh3P10287 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdh3P10287 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cdh3P10287 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh3P10287 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh3P10287 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cdh3P10287 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.15□□□□□ -0.14
Cdh3P10287 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh3P10287 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.15□□□□□ -0.14
Cdh3P10287 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cdh3P10287 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh3P10287 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh3P10287 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh3P10287 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms