Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC22.63■■□□□ 1.21
NclP09405 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC22.63■■□□□ 1.21
NclP09405 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
NclP09405 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC22.63■■□□□ 1.21
NclP09405 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC22.63■■□□□ 1.21
NclP09405 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC22.63■■□□□ 1.21
NclP09405 App-207ENSMUST00000227737 2827 ntBASIC22.63■■□□□ 1.21
NclP09405 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
NclP09405 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NclP09405 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
NclP09405 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
NclP09405 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NclP09405 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
NclP09405 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC22.62■■□□□ 1.21
NclP09405 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
NclP09405 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
NclP09405 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC22.62■■□□□ 1.21
NclP09405 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
NclP09405 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NclP09405 Gm2272-201ENSMUST00000194903 582 ntBASIC22.62■■□□□ 1.21
NclP09405 AC155252.2-201ENSMUST00000226946 680 ntBASIC22.62■■□□□ 1.21
NclP09405 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NclP09405 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
NclP09405 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NclP09405 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
NclP09405 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
NclP09405 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
NclP09405 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NclP09405 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
NclP09405 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
NclP09405 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
NclP09405 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
NclP09405 AC025913.2-201ENSMUST00000220136 1766 ntBASIC22.61■■□□□ 1.21
NclP09405 Nrn1-204ENSMUST00000224323 1779 ntBASIC22.61■■□□□ 1.21
NclP09405 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
NclP09405 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
NclP09405 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
NclP09405 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NclP09405 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NclP09405 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC22.61■■□□□ 1.21
NclP09405 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NclP09405 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
NclP09405 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
NclP09405 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
NclP09405 AC154231.1-201ENSMUST00000220564 2175 ntBASIC22.6■■□□□ 1.21
NclP09405 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC22.6■■□□□ 1.21
NclP09405 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
NclP09405 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
NclP09405 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NclP09405 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
NclP09405 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
NclP09405 AC130669.1-201ENSMUST00000228537 1672 ntBASIC22.6■■□□□ 1.21
NclP09405 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC22.6■■□□□ 1.21
NclP09405 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
NclP09405 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NclP09405 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NclP09405 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
NclP09405 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NclP09405 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NclP09405 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NclP09405 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NclP09405 Gm7556-201ENSMUST00000201178 1084 ntBASIC22.59■■□□□ 1.21
NclP09405 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NclP09405 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
NclP09405 Gm8396-201ENSMUST00000057361 823 ntBASIC22.59■■□□□ 1.21
NclP09405 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
NclP09405 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
NclP09405 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NclP09405 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
NclP09405 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
NclP09405 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC22.59■■□□□ 1.21
NclP09405 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
NclP09405 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
NclP09405 Gm13410-201ENSMUST00000117058 1415 ntBASIC22.58■■□□□ 1.21
NclP09405 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
NclP09405 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
NclP09405 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
NclP09405 Gm14701-201ENSMUST00000117156 348 ntBASIC22.58■■□□□ 1.21
NclP09405 Gm16198-201ENSMUST00000118766 670 ntBASIC22.58■■□□□ 1.21
NclP09405 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC22.58■■□□□ 1.21
NclP09405 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
NclP09405 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC22.58■■□□□ 1.21
NclP09405 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
NclP09405 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
NclP09405 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
NclP09405 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
NclP09405 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
NclP09405 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
NclP09405 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
NclP09405 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
NclP09405 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
NclP09405 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
NclP09405 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
NclP09405 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NclP09405 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NclP09405 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NclP09405 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC22.57■■□□□ 1.2
NclP09405 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
NclP09405 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NclP09405 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms