Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ApoeP08226 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ApoeP08226 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
ApoeP08226 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ApoeP08226 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
ApoeP08226 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
ApoeP08226 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ApoeP08226 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ApoeP08226 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ApoeP08226 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.47□□□□□ -0.09
ApoeP08226 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ApoeP08226 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ApoeP08226 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ApoeP08226 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ApoeP08226 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ApoeP08226 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
ApoeP08226 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ApoeP08226 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
ApoeP08226 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ApoeP08226 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ApoeP08226 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
ApoeP08226 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
ApoeP08226 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ApoeP08226 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
ApoeP08226 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.46□□□□□ -0.09
ApoeP08226 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ApoeP08226 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ApoeP08226 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
ApoeP08226 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.46□□□□□ -0.09
ApoeP08226 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ApoeP08226 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
ApoeP08226 Mir770-201ENSMUST00000103252 94 ntBASIC14.46□□□□□ -0.09
ApoeP08226 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.46□□□□□ -0.09
ApoeP08226 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.46□□□□□ -0.09
ApoeP08226 Gm22697-201ENSMUST00000175194 63 ntBASIC14.46□□□□□ -0.09
ApoeP08226 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.46□□□□□ -0.09
ApoeP08226 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.46□□□□□ -0.09
ApoeP08226 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.46□□□□□ -0.09
ApoeP08226 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ApoeP08226 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
ApoeP08226 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ApoeP08226 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ApoeP08226 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ApoeP08226 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ApoeP08226 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ApoeP08226 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ApoeP08226 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ApoeP08226 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ApoeP08226 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ApoeP08226 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ApoeP08226 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ApoeP08226 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ApoeP08226 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ApoeP08226 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
ApoeP08226 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
ApoeP08226 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.45□□□□□ -0.1
ApoeP08226 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ApoeP08226 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
ApoeP08226 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ApoeP08226 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ApoeP08226 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ApoeP08226 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ApoeP08226 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ApoeP08226 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.45□□□□□ -0.1
ApoeP08226 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.45□□□□□ -0.1
ApoeP08226 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ApoeP08226 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ApoeP08226 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
ApoeP08226 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ApoeP08226 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ApoeP08226 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
ApoeP08226 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.45□□□□□ -0.1
ApoeP08226 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ApoeP08226 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
ApoeP08226 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ApoeP08226 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ApoeP08226 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ApoeP08226 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.44□□□□□ -0.1
ApoeP08226 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
ApoeP08226 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ApoeP08226 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ApoeP08226 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.44□□□□□ -0.1
ApoeP08226 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ApoeP08226 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ApoeP08226 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
ApoeP08226 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
ApoeP08226 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
ApoeP08226 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ApoeP08226 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
ApoeP08226 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ApoeP08226 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ApoeP08226 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.44□□□□□ -0.1
ApoeP08226 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ApoeP08226 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ApoeP08226 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.44□□□□□ -0.1
ApoeP08226 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.44□□□□□ -0.1
ApoeP08226 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
ApoeP08226 Gm18101-201ENSMUST00000215769 548 ntBASIC14.44□□□□□ -0.1
ApoeP08226 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ApoeP08226 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms