Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a2P08122 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a2P08122 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a2P08122 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a2P08122 Gm15487-201ENSMUST00000122373 465 ntBASIC14.05□□□□□ -0.16
Col4a2P08122 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a2P08122 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.05□□□□□ -0.16
Col4a2P08122 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.05□□□□□ -0.16
Col4a2P08122 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.05□□□□□ -0.16
Col4a2P08122 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a2P08122 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a2P08122 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a2P08122 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.05□□□□□ -0.16
Col4a2P08122 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a2P08122 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a2P08122 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.05□□□□□ -0.16
Col4a2P08122 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.05□□□□□ -0.16
Col4a2P08122 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a2P08122 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a2P08122 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a2P08122 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a2P08122 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.04□□□□□ -0.16
Col4a2P08122 Gm44855-201ENSMUST00000205725 362 ntBASIC14.04□□□□□ -0.16
Col4a2P08122 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a2P08122 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a2P08122 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Col4a2P08122 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a2P08122 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.04□□□□□ -0.16
Col4a2P08122 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a2P08122 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a2P08122 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Col4a2P08122 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a2P08122 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.04□□□□□ -0.16
Col4a2P08122 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a2P08122 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a2P08122 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a2P08122 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a2P08122 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.04□□□□□ -0.16
Col4a2P08122 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a2P08122 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.04□□□□□ -0.16
Col4a2P08122 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a2P08122 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.04□□□□□ -0.16
Col4a2P08122 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a2P08122 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a2P08122 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col4a2P08122 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col4a2P08122 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col4a2P08122 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col4a2P08122 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Col4a2P08122 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Col4a2P08122 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.03□□□□□ -0.16
Col4a2P08122 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col4a2P08122 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col4a2P08122 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Col4a2P08122 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col4a2P08122 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col4a2P08122 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col4a2P08122 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col4a2P08122 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.03□□□□□ -0.16
Col4a2P08122 Gm44344-201ENSMUST00000200287 129 ntBASIC14.03□□□□□ -0.16
Col4a2P08122 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col4a2P08122 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Col4a2P08122 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col4a2P08122 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col4a2P08122 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a2P08122 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a2P08122 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a2P08122 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a2P08122 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Col4a2P08122 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
Col4a2P08122 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
Col4a2P08122 Gm16215-201ENSMUST00000161990 637 ntBASIC14.02□□□□□ -0.16
Col4a2P08122 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a2P08122 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.02□□□□□ -0.16
Col4a2P08122 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a2P08122 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.02□□□□□ -0.16
Col4a2P08122 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a2P08122 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a2P08122 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col4a2P08122 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.02□□□□□ -0.17
Col4a2P08122 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col4a2P08122 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.02□□□□□ -0.17
Col4a2P08122 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col4a2P08122 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col4a2P08122 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col4a2P08122 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col4a2P08122 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col4a2P08122 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col4a2P08122 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col4a2P08122 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col4a2P08122 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a2P08122 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a2P08122 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.01□□□□□ -0.17
Col4a2P08122 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Col4a2P08122 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a2P08122 Gm18766-201ENSMUST00000189811 808 ntBASIC14.01□□□□□ -0.17
Col4a2P08122 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.01□□□□□ -0.17
Col4a2P08122 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.01□□□□□ -0.17
Col4a2P08122 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a2P08122 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms