Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Asic1-205ENSMUST00000228185 1818 ntBASIC13.13□□□□□ -0.31
H3f3cP02301 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
H3f3cP02301 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H3f3cP02301 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H3f3cP02301 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
H3f3cP02301 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H3f3cP02301 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H3f3cP02301 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H3f3cP02301 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H3f3cP02301 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
H3f3cP02301 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H3f3cP02301 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H3f3cP02301 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
H3f3cP02301 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H3f3cP02301 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H3f3cP02301 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H3f3cP02301 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H3f3cP02301 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.13□□□□□ -0.31
H3f3cP02301 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
H3f3cP02301 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H3f3cP02301 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.13□□□□□ -0.31
H3f3cP02301 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
H3f3cP02301 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H3f3cP02301 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.13□□□□□ -0.31
H3f3cP02301 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.13□□□□□ -0.31
H3f3cP02301 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.13□□□□□ -0.31
H3f3cP02301 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H3f3cP02301 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
H3f3cP02301 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.13□□□□□ -0.31
H3f3cP02301 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H3f3cP02301 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H3f3cP02301 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
H3f3cP02301 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H3f3cP02301 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H3f3cP02301 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
H3f3cP02301 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H3f3cP02301 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H3f3cP02301 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H3f3cP02301 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
H3f3cP02301 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
H3f3cP02301 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H3f3cP02301 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H3f3cP02301 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H3f3cP02301 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H3f3cP02301 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H3f3cP02301 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
H3f3cP02301 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H3f3cP02301 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
H3f3cP02301 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
H3f3cP02301 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
H3f3cP02301 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
H3f3cP02301 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H3f3cP02301 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H3f3cP02301 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
H3f3cP02301 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
H3f3cP02301 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H3f3cP02301 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H3f3cP02301 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H3f3cP02301 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H3f3cP02301 Gm18195-201ENSMUST00000207604 706 ntBASIC13.12□□□□□ -0.31
H3f3cP02301 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
H3f3cP02301 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
H3f3cP02301 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
H3f3cP02301 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H3f3cP02301 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H3f3cP02301 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
H3f3cP02301 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H3f3cP02301 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
H3f3cP02301 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
H3f3cP02301 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H3f3cP02301 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
H3f3cP02301 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H3f3cP02301 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
H3f3cP02301 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.11□□□□□ -0.31
H3f3cP02301 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
H3f3cP02301 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
H3f3cP02301 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
H3f3cP02301 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.11□□□□□ -0.31
H3f3cP02301 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.11□□□□□ -0.31
H3f3cP02301 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.11□□□□□ -0.31
H3f3cP02301 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.11□□□□□ -0.31
H3f3cP02301 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
H3f3cP02301 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
H3f3cP02301 Gm10060-201ENSMUST00000212002 111 ntBASIC13.11□□□□□ -0.31
H3f3cP02301 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
H3f3cP02301 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H3f3cP02301 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
H3f3cP02301 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H3f3cP02301 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
H3f3cP02301 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H3f3cP02301 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
H3f3cP02301 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H3f3cP02301 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
H3f3cP02301 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H3f3cP02301 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.11□□□□□ -0.31
H3f3cP02301 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
H3f3cP02301 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
H3f3cP02301 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H3f3cP02301 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.11□□□□□ -0.31
H3f3cP02301 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms