Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syn1O88935 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
Syn1O88935 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Syn1O88935 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.68■□□□□ 0.1
Syn1O88935 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Syn1O88935 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Syn1O88935 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Syn1O88935 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Syn1O88935 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Syn1O88935 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Syn1O88935 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.68■□□□□ 0.1
Syn1O88935 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Syn1O88935 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Syn1O88935 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Syn1O88935 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Syn1O88935 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC15.68■□□□□ 0.1
Syn1O88935 Gm12138-201ENSMUST00000122180 951 ntBASIC15.68■□□□□ 0.1
Syn1O88935 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.68■□□□□ 0.1
Syn1O88935 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.68■□□□□ 0.1
Syn1O88935 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.68■□□□□ 0.1
Syn1O88935 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Syn1O88935 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.68■□□□□ 0.1
Syn1O88935 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Syn1O88935 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Syn1O88935 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Syn1O88935 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Syn1O88935 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Syn1O88935 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Syn1O88935 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Syn1O88935 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Syn1O88935 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Syn1O88935 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Syn1O88935 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Syn1O88935 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Syn1O88935 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Syn1O88935 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Syn1O88935 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Syn1O88935 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Syn1O88935 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Syn1O88935 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Syn1O88935 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Syn1O88935 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Syn1O88935 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Syn1O88935 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.67■□□□□ 0.1
Syn1O88935 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.67■□□□□ 0.1
Syn1O88935 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Syn1O88935 Gm6257-201ENSMUST00000163864 910 ntBASIC15.67■□□□□ 0.1
Syn1O88935 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Syn1O88935 Gm37748-201ENSMUST00000194379 1140 ntBASIC15.67■□□□□ 0.1
Syn1O88935 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC15.67■□□□□ 0.1
Syn1O88935 Gm45059-201ENSMUST00000205558 1077 ntBASIC15.67■□□□□ 0.1
Syn1O88935 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Syn1O88935 Gm6180-201ENSMUST00000065243 498 ntBASIC15.67■□□□□ 0.1
Syn1O88935 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Syn1O88935 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Syn1O88935 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Syn1O88935 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Syn1O88935 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC15.67■□□□□ 0.1
Syn1O88935 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Syn1O88935 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Syn1O88935 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Syn1O88935 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Syn1O88935 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Syn1O88935 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Syn1O88935 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.66■□□□□ 0.1
Syn1O88935 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Syn1O88935 Gm13829-201ENSMUST00000119600 138 ntBASIC15.66■□□□□ 0.1
Syn1O88935 Gm18737-201ENSMUST00000173594 937 ntBASIC15.66■□□□□ 0.1
Syn1O88935 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.66■□□□□ 0.1
Syn1O88935 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.66■□□□□ 0.1
Syn1O88935 Ighv5-13-201ENSMUST00000193550 290 ntBASIC15.66■□□□□ 0.1
Syn1O88935 Gm8515-201ENSMUST00000194852 576 ntBASIC15.66■□□□□ 0.1
Syn1O88935 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Syn1O88935 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Syn1O88935 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Syn1O88935 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Syn1O88935 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Syn1O88935 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.66■□□□□ 0.1
Syn1O88935 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Syn1O88935 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Syn1O88935 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Syn1O88935 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.66■□□□□ 0.1
Syn1O88935 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Syn1O88935 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.66■□□□□ 0.1
Syn1O88935 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Syn1O88935 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Syn1O88935 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Syn1O88935 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Syn1O88935 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Syn1O88935 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Syn1O88935 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Syn1O88935 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Syn1O88935 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Syn1O88935 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Syn1O88935 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Syn1O88935 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Syn1O88935 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Syn1O88935 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Syn1O88935 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Syn1O88935 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms