Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hdac3O88895 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.71□□□□□ -0.22
Hdac3O88895 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hdac3O88895 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hdac3O88895 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.7□□□□□ -0.22
Hdac3O88895 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hdac3O88895 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hdac3O88895 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hdac3O88895 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Hdac3O88895 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.7□□□□□ -0.22
Hdac3O88895 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hdac3O88895 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.7□□□□□ -0.22
Hdac3O88895 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hdac3O88895 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hdac3O88895 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hdac3O88895 Gm12895-201ENSMUST00000122214 226 ntBASIC13.7□□□□□ -0.22
Hdac3O88895 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.7□□□□□ -0.22
Hdac3O88895 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Hdac3O88895 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hdac3O88895 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hdac3O88895 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hdac3O88895 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Hdac3O88895 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hdac3O88895 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hdac3O88895 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hdac3O88895 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hdac3O88895 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hdac3O88895 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Hdac3O88895 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hdac3O88895 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hdac3O88895 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.7□□□□□ -0.22
Hdac3O88895 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hdac3O88895 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hdac3O88895 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hdac3O88895 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hdac3O88895 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hdac3O88895 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hdac3O88895 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hdac3O88895 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hdac3O88895 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Hdac3O88895 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hdac3O88895 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hdac3O88895 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Hdac3O88895 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hdac3O88895 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Hdac3O88895 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hdac3O88895 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hdac3O88895 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hdac3O88895 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hdac3O88895 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.69□□□□□ -0.22
Hdac3O88895 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Hdac3O88895 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hdac3O88895 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hdac3O88895 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hdac3O88895 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hdac3O88895 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.69□□□□□ -0.22
Hdac3O88895 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hdac3O88895 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hdac3O88895 Gm7367-201ENSMUST00000057611 492 ntBASIC13.69□□□□□ -0.22
Hdac3O88895 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hdac3O88895 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Hdac3O88895 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hdac3O88895 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hdac3O88895 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hdac3O88895 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hdac3O88895 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hdac3O88895 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hdac3O88895 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.69□□□□□ -0.22
Hdac3O88895 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Hdac3O88895 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hdac3O88895 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hdac3O88895 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hdac3O88895 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hdac3O88895 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hdac3O88895 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.68□□□□□ -0.22
Hdac3O88895 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hdac3O88895 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hdac3O88895 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hdac3O88895 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hdac3O88895 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hdac3O88895 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hdac3O88895 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hdac3O88895 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Hdac3O88895 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hdac3O88895 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hdac3O88895 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hdac3O88895 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hdac3O88895 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.68□□□□□ -0.22
Hdac3O88895 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.68□□□□□ -0.22
Hdac3O88895 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hdac3O88895 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.68□□□□□ -0.22
Hdac3O88895 Ank2-226ENSMUST00000189368 339 ntBASIC13.68□□□□□ -0.22
Hdac3O88895 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hdac3O88895 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.68□□□□□ -0.22
Hdac3O88895 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hdac3O88895 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hdac3O88895 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hdac3O88895 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hdac3O88895 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hdac3O88895 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms