Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mmp8O70138 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Mmp8O70138 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mmp8O70138 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mmp8O70138 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mmp8O70138 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Mmp8O70138 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp8O70138 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp8O70138 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp8O70138 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp8O70138 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp8O70138 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp8O70138 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp8O70138 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp8O70138 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp8O70138 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Mmp8O70138 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp8O70138 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp8O70138 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.6■□□□□ 0.57
Mmp8O70138 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp8O70138 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Mmp8O70138 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC18.6■□□□□ 0.57
Mmp8O70138 Gm9727-201ENSMUST00000161387 555 ntBASIC18.6■□□□□ 0.57
Mmp8O70138 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.6■□□□□ 0.57
Mmp8O70138 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Mmp8O70138 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.6■□□□□ 0.57
Mmp8O70138 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Mmp8O70138 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp8O70138 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp8O70138 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.6■□□□□ 0.57
Mmp8O70138 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
Mmp8O70138 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp8O70138 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp8O70138 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mmp8O70138 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp8O70138 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp8O70138 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp8O70138 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp8O70138 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Mmp8O70138 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp8O70138 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp8O70138 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC18.59■□□□□ 0.57
Mmp8O70138 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Mmp8O70138 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp8O70138 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp8O70138 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp8O70138 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Mmp8O70138 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC18.59■□□□□ 0.57
Mmp8O70138 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp8O70138 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp8O70138 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp8O70138 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp8O70138 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp8O70138 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp8O70138 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mmp8O70138 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Mmp8O70138 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Mmp8O70138 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Mmp8O70138 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Mmp8O70138 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Mmp8O70138 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Mmp8O70138 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Mmp8O70138 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Mmp8O70138 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
Mmp8O70138 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Mmp8O70138 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Mmp8O70138 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
Mmp8O70138 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Mmp8O70138 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Mmp8O70138 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Mmp8O70138 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Mmp8O70138 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Mmp8O70138 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp8O70138 Gm10584-201ENSMUST00000207036 2628 ntBASIC18.57■□□□□ 0.56
Mmp8O70138 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp8O70138 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp8O70138 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp8O70138 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp8O70138 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp8O70138 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp8O70138 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp8O70138 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp8O70138 AC154412.1-201ENSMUST00000226540 2786 ntBASIC18.57■□□□□ 0.56
Mmp8O70138 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp8O70138 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC18.57■□□□□ 0.56
Mmp8O70138 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp8O70138 Gm43767-201ENSMUST00000198933 381 ntBASIC18.57■□□□□ 0.56
Mmp8O70138 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.57■□□□□ 0.56
Mmp8O70138 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp8O70138 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Mmp8O70138 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp8O70138 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp8O70138 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp8O70138 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC18.57■□□□□ 0.56
Mmp8O70138 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp8O70138 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Mmp8O70138 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mmp8O70138 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mmp8O70138 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mmp8O70138 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms