Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trdmt1O55055 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trdmt1O55055 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trdmt1O55055 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trdmt1O55055 Gm13015-201ENSMUST00000118674 204 ntBASIC16.76■□□□□ 0.27
Trdmt1O55055 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.76■□□□□ 0.27
Trdmt1O55055 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.76■□□□□ 0.27
Trdmt1O55055 Gm27437-201ENSMUST00000183429 107 ntBASIC16.76■□□□□ 0.27
Trdmt1O55055 Gm17837-201ENSMUST00000186435 985 ntBASIC16.76■□□□□ 0.27
Trdmt1O55055 Gm29541-201ENSMUST00000191351 678 ntBASIC16.76■□□□□ 0.27
Trdmt1O55055 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trdmt1O55055 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.76■□□□□ 0.27
Trdmt1O55055 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.76■□□□□ 0.27
Trdmt1O55055 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trdmt1O55055 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trdmt1O55055 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trdmt1O55055 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trdmt1O55055 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trdmt1O55055 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trdmt1O55055 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trdmt1O55055 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trdmt1O55055 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trdmt1O55055 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trdmt1O55055 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trdmt1O55055 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trdmt1O55055 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trdmt1O55055 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trdmt1O55055 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trdmt1O55055 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Trdmt1O55055 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Trdmt1O55055 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Trdmt1O55055 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trdmt1O55055 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trdmt1O55055 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.75■□□□□ 0.27
Trdmt1O55055 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.75■□□□□ 0.27
Trdmt1O55055 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trdmt1O55055 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.75■□□□□ 0.27
Trdmt1O55055 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trdmt1O55055 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trdmt1O55055 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trdmt1O55055 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trdmt1O55055 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trdmt1O55055 Gm8116-201ENSMUST00000182917 1201 ntBASIC16.75■□□□□ 0.27
Trdmt1O55055 Gm27920-201ENSMUST00000183953 96 ntBASIC16.75■□□□□ 0.27
Trdmt1O55055 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trdmt1O55055 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.75■□□□□ 0.27
Trdmt1O55055 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trdmt1O55055 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trdmt1O55055 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trdmt1O55055 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trdmt1O55055 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trdmt1O55055 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trdmt1O55055 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trdmt1O55055 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trdmt1O55055 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trdmt1O55055 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.74■□□□□ 0.27
Trdmt1O55055 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trdmt1O55055 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trdmt1O55055 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trdmt1O55055 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trdmt1O55055 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trdmt1O55055 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trdmt1O55055 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.74■□□□□ 0.27
Trdmt1O55055 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trdmt1O55055 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trdmt1O55055 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Trdmt1O55055 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trdmt1O55055 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.74■□□□□ 0.27
Trdmt1O55055 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trdmt1O55055 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.74■□□□□ 0.27
Trdmt1O55055 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trdmt1O55055 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trdmt1O55055 Gm18049-201ENSMUST00000208909 581 ntBASIC16.74■□□□□ 0.27
Trdmt1O55055 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trdmt1O55055 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trdmt1O55055 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trdmt1O55055 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Trdmt1O55055 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trdmt1O55055 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trdmt1O55055 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Trdmt1O55055 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.74■□□□□ 0.27
Trdmt1O55055 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trdmt1O55055 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.73■□□□□ 0.27
Trdmt1O55055 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trdmt1O55055 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trdmt1O55055 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Trdmt1O55055 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trdmt1O55055 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trdmt1O55055 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trdmt1O55055 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trdmt1O55055 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trdmt1O55055 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trdmt1O55055 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trdmt1O55055 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trdmt1O55055 Gm8410-201ENSMUST00000117225 605 ntBASIC16.73■□□□□ 0.27
Trdmt1O55055 Gm13453-201ENSMUST00000118708 357 ntBASIC16.73■□□□□ 0.27
Trdmt1O55055 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.73■□□□□ 0.27
Trdmt1O55055 Gm27989-201ENSMUST00000184721 107 ntBASIC16.73■□□□□ 0.27
Trdmt1O55055 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.73■□□□□ 0.27
Trdmt1O55055 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms