Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.87□□□□□ -0.19
Rnf13O54965 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Rnf13O54965 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Rnf13O54965 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf13O54965 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf13O54965 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf13O54965 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf13O54965 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf13O54965 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf13O54965 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf13O54965 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf13O54965 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf13O54965 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf13O54965 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf13O54965 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Rnf13O54965 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf13O54965 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Rnf13O54965 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Rnf13O54965 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf13O54965 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf13O54965 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.86□□□□□ -0.19
Rnf13O54965 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf13O54965 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.86□□□□□ -0.19
Rnf13O54965 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
Rnf13O54965 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf13O54965 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf13O54965 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf13O54965 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC13.86□□□□□ -0.19
Rnf13O54965 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.86□□□□□ -0.19
Rnf13O54965 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf13O54965 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.86□□□□□ -0.19
Rnf13O54965 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.86□□□□□ -0.19
Rnf13O54965 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf13O54965 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf13O54965 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Rnf13O54965 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf13O54965 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf13O54965 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Rnf13O54965 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf13O54965 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf13O54965 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf13O54965 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf13O54965 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.86□□□□□ -0.19
Rnf13O54965 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf13O54965 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Rnf13O54965 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Rnf13O54965 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf13O54965 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Rnf13O54965 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf13O54965 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf13O54965 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf13O54965 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf13O54965 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf13O54965 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Rnf13O54965 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Rnf13O54965 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
Rnf13O54965 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf13O54965 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf13O54965 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf13O54965 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf13O54965 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.85□□□□□ -0.19
Rnf13O54965 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.85□□□□□ -0.19
Rnf13O54965 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf13O54965 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf13O54965 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Rnf13O54965 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf13O54965 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf13O54965 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf13O54965 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf13O54965 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Rnf13O54965 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf13O54965 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf13O54965 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.85□□□□□ -0.19
Rnf13O54965 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.85□□□□□ -0.19
Rnf13O54965 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rnf13O54965 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf13O54965 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf13O54965 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf13O54965 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf13O54965 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf13O54965 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf13O54965 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf13O54965 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf13O54965 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf13O54965 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Rnf13O54965 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf13O54965 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf13O54965 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf13O54965 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf13O54965 Gm11950-201ENSMUST00000121615 838 ntBASIC13.84□□□□□ -0.19
Rnf13O54965 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.84□□□□□ -0.19
Rnf13O54965 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf13O54965 Gm6345-202ENSMUST00000180900 204 ntBASIC13.84□□□□□ -0.19
Rnf13O54965 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.84□□□□□ -0.19
Rnf13O54965 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.84□□□□□ -0.19
Rnf13O54965 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf13O54965 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf13O54965 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Rnf13O54965 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf13O54965 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms