Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cldn5O54942 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cldn5O54942 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cldn5O54942 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cldn5O54942 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cldn5O54942 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cldn5O54942 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Cldn5O54942 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
Cldn5O54942 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cldn5O54942 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.83■□□□□ 0.12
Cldn5O54942 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cldn5O54942 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Cldn5O54942 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.83■□□□□ 0.12
Cldn5O54942 Thap2-203ENSMUST00000218989 527 ntBASIC15.83■□□□□ 0.12
Cldn5O54942 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.83■□□□□ 0.12
Cldn5O54942 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Cldn5O54942 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Cldn5O54942 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cldn5O54942 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cldn5O54942 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cldn5O54942 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
Cldn5O54942 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cldn5O54942 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn5O54942 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn5O54942 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn5O54942 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn5O54942 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn5O54942 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn5O54942 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn5O54942 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.82■□□□□ 0.12
Cldn5O54942 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn5O54942 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn5O54942 Gm9385-201ENSMUST00000117563 472 ntBASIC15.82■□□□□ 0.12
Cldn5O54942 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn5O54942 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn5O54942 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn5O54942 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn5O54942 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Cldn5O54942 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn5O54942 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn5O54942 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn5O54942 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.82■□□□□ 0.12
Cldn5O54942 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn5O54942 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn5O54942 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn5O54942 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn5O54942 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn5O54942 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn5O54942 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn5O54942 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn5O54942 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn5O54942 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn5O54942 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn5O54942 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Cldn5O54942 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn5O54942 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Cldn5O54942 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn5O54942 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldn5O54942 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldn5O54942 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldn5O54942 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldn5O54942 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cldn5O54942 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cldn5O54942 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldn5O54942 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldn5O54942 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cldn5O54942 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cldn5O54942 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.81■□□□□ 0.12
Cldn5O54942 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldn5O54942 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.81■□□□□ 0.12
Cldn5O54942 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cldn5O54942 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cldn5O54942 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Cldn5O54942 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldn5O54942 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldn5O54942 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Cldn5O54942 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldn5O54942 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldn5O54942 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldn5O54942 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldn5O54942 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Cldn5O54942 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.81■□□□□ 0.12
Cldn5O54942 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Cldn5O54942 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cldn5O54942 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cldn5O54942 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cldn5O54942 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cldn5O54942 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cldn5O54942 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cldn5O54942 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cldn5O54942 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cldn5O54942 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cldn5O54942 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cldn5O54942 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cldn5O54942 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.8■□□□□ 0.12
Cldn5O54942 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cldn5O54942 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.8■□□□□ 0.12
Cldn5O54942 Gm16198-201ENSMUST00000118766 670 ntBASIC15.8■□□□□ 0.12
Cldn5O54942 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cldn5O54942 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms