Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sptlc1O35704 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.72■□□□□ 0.27
Sptlc1O35704 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sptlc1O35704 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Sptlc1O35704 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sptlc1O35704 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Sptlc1O35704 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sptlc1O35704 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Sptlc1O35704 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sptlc1O35704 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sptlc1O35704 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.72■□□□□ 0.27
Sptlc1O35704 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sptlc1O35704 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sptlc1O35704 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Sptlc1O35704 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sptlc1O35704 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sptlc1O35704 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sptlc1O35704 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.72■□□□□ 0.27
Sptlc1O35704 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sptlc1O35704 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sptlc1O35704 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sptlc1O35704 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.72■□□□□ 0.27
Sptlc1O35704 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sptlc1O35704 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sptlc1O35704 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sptlc1O35704 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sptlc1O35704 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sptlc1O35704 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sptlc1O35704 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Sptlc1O35704 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sptlc1O35704 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sptlc1O35704 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sptlc1O35704 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sptlc1O35704 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sptlc1O35704 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sptlc1O35704 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.71■□□□□ 0.27
Sptlc1O35704 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sptlc1O35704 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sptlc1O35704 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Sptlc1O35704 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.71■□□□□ 0.27
Sptlc1O35704 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.71■□□□□ 0.27
Sptlc1O35704 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sptlc1O35704 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Sptlc1O35704 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.71■□□□□ 0.27
Sptlc1O35704 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sptlc1O35704 Gm43125-201ENSMUST00000201724 730 ntBASIC16.71■□□□□ 0.27
Sptlc1O35704 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sptlc1O35704 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.71■□□□□ 0.27
Sptlc1O35704 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sptlc1O35704 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.71■□□□□ 0.27
Sptlc1O35704 Gm10154-201ENSMUST00000084445 354 ntBASIC16.71■□□□□ 0.27
Sptlc1O35704 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Sptlc1O35704 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sptlc1O35704 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sptlc1O35704 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.71■□□□□ 0.27
Sptlc1O35704 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Sptlc1O35704 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sptlc1O35704 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sptlc1O35704 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.71■□□□□ 0.27
Sptlc1O35704 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sptlc1O35704 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sptlc1O35704 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Sptlc1O35704 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.26
Sptlc1O35704 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Sptlc1O35704 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sptlc1O35704 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sptlc1O35704 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sptlc1O35704 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Sptlc1O35704 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sptlc1O35704 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sptlc1O35704 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sptlc1O35704 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sptlc1O35704 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Sptlc1O35704 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.7■□□□□ 0.26
Sptlc1O35704 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sptlc1O35704 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sptlc1O35704 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sptlc1O35704 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.7■□□□□ 0.26
Sptlc1O35704 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.7■□□□□ 0.26
Sptlc1O35704 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sptlc1O35704 AA543401-201ENSMUST00000164248 1269 ntBASIC16.7■□□□□ 0.26
Sptlc1O35704 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.7■□□□□ 0.26
Sptlc1O35704 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.7■□□□□ 0.26
Sptlc1O35704 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.7■□□□□ 0.26
Sptlc1O35704 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sptlc1O35704 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sptlc1O35704 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Sptlc1O35704 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sptlc1O35704 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sptlc1O35704 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sptlc1O35704 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sptlc1O35704 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Sptlc1O35704 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sptlc1O35704 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sptlc1O35704 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Sptlc1O35704 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sptlc1O35704 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sptlc1O35704 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sptlc1O35704 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sptlc1O35704 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms