Protein–RNA interactions for Protein: O35638

Stag2, Cohesin subunit SA-2, mousemouse

Predictions only

Length 1,231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag2O35638 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.46■□□□□ 0.39
Stag2O35638 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Stag2O35638 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Stag2O35638 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Stag2O35638 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Stag2O35638 Gm12008-201ENSMUST00000117791 755 ntBASIC17.46■□□□□ 0.39
Stag2O35638 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Stag2O35638 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.46■□□□□ 0.39
Stag2O35638 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Stag2O35638 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Stag2O35638 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Stag2O35638 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Stag2O35638 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Stag2O35638 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Stag2O35638 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.46■□□□□ 0.38
Stag2O35638 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Stag2O35638 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Stag2O35638 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stag2O35638 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stag2O35638 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stag2O35638 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stag2O35638 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Stag2O35638 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stag2O35638 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stag2O35638 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stag2O35638 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stag2O35638 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.45■□□□□ 0.38
Stag2O35638 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stag2O35638 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.45■□□□□ 0.38
Stag2O35638 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stag2O35638 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Stag2O35638 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.45■□□□□ 0.38
Stag2O35638 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stag2O35638 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Stag2O35638 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.45■□□□□ 0.38
Stag2O35638 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Stag2O35638 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stag2O35638 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Stag2O35638 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stag2O35638 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stag2O35638 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Stag2O35638 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Stag2O35638 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Stag2O35638 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Stag2O35638 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Stag2O35638 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stag2O35638 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stag2O35638 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stag2O35638 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stag2O35638 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Stag2O35638 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stag2O35638 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stag2O35638 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stag2O35638 BC037039-201ENSMUST00000192003 2205 ntBASIC17.44■□□□□ 0.38
Stag2O35638 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stag2O35638 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.44■□□□□ 0.38
Stag2O35638 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stag2O35638 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stag2O35638 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Stag2O35638 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stag2O35638 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stag2O35638 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Stag2O35638 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Stag2O35638 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.44■□□□□ 0.38
Stag2O35638 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stag2O35638 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stag2O35638 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stag2O35638 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Stag2O35638 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stag2O35638 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stag2O35638 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stag2O35638 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stag2O35638 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Stag2O35638 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Stag2O35638 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Stag2O35638 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stag2O35638 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stag2O35638 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stag2O35638 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Stag2O35638 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Stag2O35638 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Stag2O35638 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Stag2O35638 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Stag2O35638 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Stag2O35638 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Stag2O35638 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Stag2O35638 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Stag2O35638 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Stag2O35638 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Stag2O35638 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.43■□□□□ 0.38
Stag2O35638 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.43■□□□□ 0.38
Stag2O35638 Gm16198-201ENSMUST00000118766 670 ntBASIC17.43■□□□□ 0.38
Stag2O35638 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Stag2O35638 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Stag2O35638 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Stag2O35638 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.43■□□□□ 0.38
Stag2O35638 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Stag2O35638 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.43■□□□□ 0.38
Stag2O35638 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Stag2O35638 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms