Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Stx1aO35526 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Stx1aO35526 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Stx1aO35526 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Stx1aO35526 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Stx1aO35526 Gm15794-201ENSMUST00000120182 631 ntBASIC17.19■□□□□ 0.34
Stx1aO35526 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.19■□□□□ 0.34
Stx1aO35526 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Stx1aO35526 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.19■□□□□ 0.34
Stx1aO35526 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.19■□□□□ 0.34
Stx1aO35526 Gm9172-201ENSMUST00000212092 954 ntBASIC17.19■□□□□ 0.34
Stx1aO35526 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Stx1aO35526 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.19■□□□□ 0.34
Stx1aO35526 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Stx1aO35526 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Stx1aO35526 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Stx1aO35526 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Stx1aO35526 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Stx1aO35526 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Stx1aO35526 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Stx1aO35526 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Stx1aO35526 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Stx1aO35526 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Stx1aO35526 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Stx1aO35526 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Stx1aO35526 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Stx1aO35526 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Stx1aO35526 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Stx1aO35526 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Stx1aO35526 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Stx1aO35526 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Stx1aO35526 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC17.18■□□□□ 0.34
Stx1aO35526 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.18■□□□□ 0.34
Stx1aO35526 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Stx1aO35526 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Stx1aO35526 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Stx1aO35526 Gm19164-201ENSMUST00000210667 640 ntBASIC17.18■□□□□ 0.34
Stx1aO35526 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.18■□□□□ 0.34
Stx1aO35526 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.18■□□□□ 0.34
Stx1aO35526 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Stx1aO35526 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Stx1aO35526 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Stx1aO35526 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.18■□□□□ 0.34
Stx1aO35526 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Stx1aO35526 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Stx1aO35526 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Stx1aO35526 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Stx1aO35526 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.18■□□□□ 0.34
Stx1aO35526 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Stx1aO35526 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Stx1aO35526 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Stx1aO35526 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Stx1aO35526 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Stx1aO35526 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Stx1aO35526 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Stx1aO35526 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Stx1aO35526 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Stx1aO35526 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Stx1aO35526 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Stx1aO35526 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Stx1aO35526 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Stx1aO35526 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Stx1aO35526 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Stx1aO35526 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Stx1aO35526 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Stx1aO35526 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Stx1aO35526 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Stx1aO35526 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Stx1aO35526 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Stx1aO35526 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.17■□□□□ 0.34
Stx1aO35526 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Stx1aO35526 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Stx1aO35526 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Stx1aO35526 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Stx1aO35526 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Stx1aO35526 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Stx1aO35526 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Stx1aO35526 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Stx1aO35526 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Stx1aO35526 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Stx1aO35526 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Stx1aO35526 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Stx1aO35526 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.16■□□□□ 0.34
Stx1aO35526 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.16■□□□□ 0.34
Stx1aO35526 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.16■□□□□ 0.34
Stx1aO35526 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.16■□□□□ 0.34
Stx1aO35526 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.16■□□□□ 0.34
Stx1aO35526 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Stx1aO35526 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Stx1aO35526 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Stx1aO35526 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Stx1aO35526 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.16■□□□□ 0.34
Stx1aO35526 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Stx1aO35526 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Stx1aO35526 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Stx1aO35526 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Stx1aO35526 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Stx1aO35526 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Stx1aO35526 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Stx1aO35526 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms