Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.43■□□□□ 0.22
Tnfrsf11aO35305 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
Tnfrsf11aO35305 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf11aO35305 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf11aO35305 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf11aO35305 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf11aO35305 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Tnfrsf11aO35305 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.43■□□□□ 0.22
Tnfrsf11aO35305 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf11aO35305 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf11aO35305 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf11aO35305 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.43■□□□□ 0.22
Tnfrsf11aO35305 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf11aO35305 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf11aO35305 Efs-202ENSMUST00000227037 2540 ntBASIC16.43■□□□□ 0.22
Tnfrsf11aO35305 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf11aO35305 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.43■□□□□ 0.22
Tnfrsf11aO35305 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf11aO35305 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf11aO35305 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf11aO35305 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf11aO35305 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf11aO35305 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf11aO35305 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf11aO35305 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf11aO35305 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf11aO35305 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf11aO35305 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf11aO35305 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf11aO35305 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf11aO35305 Gm1401-201ENSMUST00000122048 772 ntBASIC16.42■□□□□ 0.22
Tnfrsf11aO35305 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf11aO35305 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.42■□□□□ 0.22
Tnfrsf11aO35305 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.42■□□□□ 0.22
Tnfrsf11aO35305 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.42■□□□□ 0.22
Tnfrsf11aO35305 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.42■□□□□ 0.22
Tnfrsf11aO35305 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.42■□□□□ 0.22
Tnfrsf11aO35305 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Tnfrsf11aO35305 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf11aO35305 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf11aO35305 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf11aO35305 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf11aO35305 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf11aO35305 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf11aO35305 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf11aO35305 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf11aO35305 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 Gm13597-201ENSMUST00000121239 375 ntBASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 Gm7787-201ENSMUST00000216858 688 ntBASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11aO35305 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf11aO35305 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.4■□□□□ 0.22
Tnfrsf11aO35305 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Tnfrsf11aO35305 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.4■□□□□ 0.22
Tnfrsf11aO35305 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf11aO35305 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Tnfrsf11aO35305 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.4■□□□□ 0.22
Tnfrsf11aO35305 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.4■□□□□ 0.22
Tnfrsf11aO35305 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf11aO35305 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf11aO35305 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Tnfrsf11aO35305 Gm44771-201ENSMUST00000206975 626 ntBASIC16.4■□□□□ 0.22
Tnfrsf11aO35305 AW822252-206ENSMUST00000208904 237 ntBASIC16.4■□□□□ 0.22
Tnfrsf11aO35305 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf11aO35305 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms