Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.64□□□□□ -0.23
Alx4O35137 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.64□□□□□ -0.23
Alx4O35137 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Alx4O35137 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.64□□□□□ -0.23
Alx4O35137 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.64□□□□□ -0.23
Alx4O35137 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx4O35137 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx4O35137 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Alx4O35137 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx4O35137 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx4O35137 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx4O35137 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx4O35137 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx4O35137 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.64□□□□□ -0.23
Alx4O35137 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx4O35137 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.64□□□□□ -0.23
Alx4O35137 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Alx4O35137 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx4O35137 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx4O35137 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx4O35137 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx4O35137 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Alx4O35137 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx4O35137 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx4O35137 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx4O35137 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx4O35137 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Alx4O35137 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx4O35137 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Alx4O35137 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Alx4O35137 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx4O35137 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx4O35137 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Alx4O35137 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.63□□□□□ -0.23
Alx4O35137 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx4O35137 Gm6345-202ENSMUST00000180900 204 ntBASIC13.63□□□□□ -0.23
Alx4O35137 Gm44454-201ENSMUST00000198541 138 ntBASIC13.63□□□□□ -0.23
Alx4O35137 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Alx4O35137 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx4O35137 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.63□□□□□ -0.23
Alx4O35137 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.63□□□□□ -0.23
Alx4O35137 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.63□□□□□ -0.23
Alx4O35137 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx4O35137 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Alx4O35137 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Alx4O35137 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Alx4O35137 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Alx4O35137 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Alx4O35137 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Alx4O35137 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Alx4O35137 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Alx4O35137 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.62□□□□□ -0.23
Alx4O35137 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.62□□□□□ -0.23
Alx4O35137 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Alx4O35137 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Alx4O35137 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Alx4O35137 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Alx4O35137 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Alx4O35137 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Alx4O35137 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.62□□□□□ -0.23
Alx4O35137 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Alx4O35137 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.62□□□□□ -0.23
Alx4O35137 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Alx4O35137 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Alx4O35137 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.62□□□□□ -0.23
Alx4O35137 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Alx4O35137 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Alx4O35137 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Alx4O35137 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Alx4O35137 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Alx4O35137 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Alx4O35137 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Alx4O35137 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Alx4O35137 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Alx4O35137 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Alx4O35137 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.62□□□□□ -0.23
Alx4O35137 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Alx4O35137 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Alx4O35137 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.61□□□□□ -0.23
Alx4O35137 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.61□□□□□ -0.23
Alx4O35137 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.61□□□□□ -0.23
Alx4O35137 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Alx4O35137 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Alx4O35137 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Alx4O35137 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Alx4O35137 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Alx4O35137 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Alx4O35137 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Alx4O35137 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.61□□□□□ -0.23
Alx4O35137 Gm8344-201ENSMUST00000119813 856 ntBASIC13.61□□□□□ -0.23
Alx4O35137 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.61□□□□□ -0.23
Alx4O35137 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.61□□□□□ -0.23
Alx4O35137 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC13.61□□□□□ -0.23
Alx4O35137 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.61□□□□□ -0.23
Alx4O35137 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.61□□□□□ -0.23
Alx4O35137 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Alx4O35137 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Alx4O35137 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Alx4O35137 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Alx4O35137 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms