Protein–RNA interactions for Protein: O35114

Scarb2, Lysosome membrane protein 2, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb2O35114 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scarb2O35114 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scarb2O35114 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scarb2O35114 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scarb2O35114 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scarb2O35114 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scarb2O35114 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.28□□□□□ -0.12
Scarb2O35114 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Scarb2O35114 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scarb2O35114 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.28□□□□□ -0.12
Scarb2O35114 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Scarb2O35114 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scarb2O35114 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.28□□□□□ -0.12
Scarb2O35114 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Scarb2O35114 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scarb2O35114 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.28□□□□□ -0.12
Scarb2O35114 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scarb2O35114 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scarb2O35114 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scarb2O35114 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scarb2O35114 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scarb2O35114 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scarb2O35114 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scarb2O35114 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scarb2O35114 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scarb2O35114 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scarb2O35114 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scarb2O35114 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scarb2O35114 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.28□□□□□ -0.12
Scarb2O35114 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scarb2O35114 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.28□□□□□ -0.12
Scarb2O35114 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scarb2O35114 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Scarb2O35114 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scarb2O35114 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scarb2O35114 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scarb2O35114 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scarb2O35114 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scarb2O35114 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.27□□□□□ -0.12
Scarb2O35114 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scarb2O35114 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scarb2O35114 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scarb2O35114 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scarb2O35114 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scarb2O35114 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scarb2O35114 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Scarb2O35114 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.27□□□□□ -0.12
Scarb2O35114 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.27□□□□□ -0.13
Scarb2O35114 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.27□□□□□ -0.13
Scarb2O35114 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.27□□□□□ -0.13
Scarb2O35114 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Scarb2O35114 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scarb2O35114 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scarb2O35114 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scarb2O35114 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scarb2O35114 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scarb2O35114 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scarb2O35114 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scarb2O35114 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scarb2O35114 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scarb2O35114 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scarb2O35114 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Scarb2O35114 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scarb2O35114 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scarb2O35114 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scarb2O35114 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scarb2O35114 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scarb2O35114 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scarb2O35114 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scarb2O35114 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scarb2O35114 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scarb2O35114 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scarb2O35114 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scarb2O35114 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scarb2O35114 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scarb2O35114 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scarb2O35114 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scarb2O35114 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.26□□□□□ -0.13
Scarb2O35114 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scarb2O35114 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.26□□□□□ -0.13
Scarb2O35114 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scarb2O35114 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scarb2O35114 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.26□□□□□ -0.13
Scarb2O35114 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scarb2O35114 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scarb2O35114 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scarb2O35114 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scarb2O35114 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scarb2O35114 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scarb2O35114 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scarb2O35114 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scarb2O35114 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scarb2O35114 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scarb2O35114 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scarb2O35114 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scarb2O35114 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scarb2O35114 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scarb2O35114 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scarb2O35114 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scarb2O35114 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms