Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Gm44454-201ENSMUST00000198541 138 ntBASIC14.68□□□□□ -0.06
Polr2jO08740 Gm19164-201ENSMUST00000210667 640 ntBASIC14.68□□□□□ -0.06
Polr2jO08740 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Polr2jO08740 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Polr2jO08740 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.68□□□□□ -0.06
Polr2jO08740 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.68□□□□□ -0.06
Polr2jO08740 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.68□□□□□ -0.06
Polr2jO08740 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Polr2jO08740 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Polr2jO08740 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Polr2jO08740 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Polr2jO08740 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Polr2jO08740 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Polr2jO08740 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Polr2jO08740 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
Polr2jO08740 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Polr2jO08740 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Polr2jO08740 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Polr2jO08740 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Polr2jO08740 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Polr2jO08740 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Polr2jO08740 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Polr2jO08740 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Polr2jO08740 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Polr2jO08740 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Polr2jO08740 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Polr2jO08740 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Polr2jO08740 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.67□□□□□ -0.06
Polr2jO08740 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.67□□□□□ -0.06
Polr2jO08740 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Polr2jO08740 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.67□□□□□ -0.06
Polr2jO08740 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.67□□□□□ -0.06
Polr2jO08740 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Polr2jO08740 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Polr2jO08740 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Polr2jO08740 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Polr2jO08740 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Polr2jO08740 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Polr2jO08740 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Polr2jO08740 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
Polr2jO08740 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Polr2jO08740 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Polr2jO08740 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Polr2jO08740 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Polr2jO08740 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Polr2jO08740 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Polr2jO08740 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Polr2jO08740 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Polr2jO08740 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Polr2jO08740 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.66□□□□□ -0.06
Polr2jO08740 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Polr2jO08740 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Polr2jO08740 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Polr2jO08740 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Polr2jO08740 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Polr2jO08740 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Polr2jO08740 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Polr2jO08740 Mir3081-201ENSMUST00000175305 84 ntBASIC14.66□□□□□ -0.06
Polr2jO08740 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Polr2jO08740 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Polr2jO08740 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Polr2jO08740 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Polr2jO08740 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Polr2jO08740 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Polr2jO08740 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Polr2jO08740 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Polr2jO08740 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Polr2jO08740 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Polr2jO08740 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Polr2jO08740 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Polr2jO08740 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Polr2jO08740 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Polr2jO08740 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Polr2jO08740 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Polr2jO08740 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Polr2jO08740 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Polr2jO08740 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Polr2jO08740 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Polr2jO08740 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Polr2jO08740 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Polr2jO08740 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Polr2jO08740 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Polr2jO08740 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Polr2jO08740 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Polr2jO08740 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Polr2jO08740 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.65□□□□□ -0.06
Polr2jO08740 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Polr2jO08740 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.65□□□□□ -0.06
Polr2jO08740 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Polr2jO08740 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Polr2jO08740 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Polr2jO08740 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.65□□□□□ -0.06
Polr2jO08740 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Polr2jO08740 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.65□□□□□ -0.06
Polr2jO08740 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Polr2jO08740 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Polr2jO08740 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Polr2jO08740 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Polr2jO08740 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Polr2jO08740 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms