Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa8J3QNX5 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.97□□□□□ -0.17
Shisa8J3QNX5 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Shisa8J3QNX5 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.96□□□□□ -0.17
Shisa8J3QNX5 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shisa8J3QNX5 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Shisa8J3QNX5 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Shisa8J3QNX5 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Shisa8J3QNX5 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Shisa8J3QNX5 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shisa8J3QNX5 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shisa8J3QNX5 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Shisa8J3QNX5 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shisa8J3QNX5 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Shisa8J3QNX5 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shisa8J3QNX5 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shisa8J3QNX5 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Shisa8J3QNX5 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.96□□□□□ -0.17
Shisa8J3QNX5 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC13.96□□□□□ -0.17
Shisa8J3QNX5 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shisa8J3QNX5 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shisa8J3QNX5 Gm9987-201ENSMUST00000069768 567 ntBASIC13.96□□□□□ -0.17
Shisa8J3QNX5 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.96□□□□□ -0.17
Shisa8J3QNX5 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Shisa8J3QNX5 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shisa8J3QNX5 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Shisa8J3QNX5 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shisa8J3QNX5 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shisa8J3QNX5 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Shisa8J3QNX5 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shisa8J3QNX5 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shisa8J3QNX5 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shisa8J3QNX5 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shisa8J3QNX5 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shisa8J3QNX5 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Shisa8J3QNX5 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Shisa8J3QNX5 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa8J3QNX5 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Shisa8J3QNX5 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.95□□□□□ -0.18
Shisa8J3QNX5 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Shisa8J3QNX5 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa8J3QNX5 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa8J3QNX5 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa8J3QNX5 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa8J3QNX5 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa8J3QNX5 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.95□□□□□ -0.18
Shisa8J3QNX5 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa8J3QNX5 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Shisa8J3QNX5 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa8J3QNX5 Gm22697-201ENSMUST00000175194 63 ntBASIC13.95□□□□□ -0.18
Shisa8J3QNX5 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.95□□□□□ -0.18
Shisa8J3QNX5 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.95□□□□□ -0.18
Shisa8J3QNX5 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.95□□□□□ -0.18
Shisa8J3QNX5 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Shisa8J3QNX5 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa8J3QNX5 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa8J3QNX5 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa8J3QNX5 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa8J3QNX5 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa8J3QNX5 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa8J3QNX5 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa8J3QNX5 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa8J3QNX5 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa8J3QNX5 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa8J3QNX5 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa8J3QNX5 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa8J3QNX5 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa8J3QNX5 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.94□□□□□ -0.18
Shisa8J3QNX5 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa8J3QNX5 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa8J3QNX5 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC13.94□□□□□ -0.18
Shisa8J3QNX5 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Shisa8J3QNX5 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa8J3QNX5 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa8J3QNX5 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Shisa8J3QNX5 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.94□□□□□ -0.18
Shisa8J3QNX5 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa8J3QNX5 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa8J3QNX5 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa8J3QNX5 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa8J3QNX5 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shisa8J3QNX5 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa8J3QNX5 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.93□□□□□ -0.18
Shisa8J3QNX5 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa8J3QNX5 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
Shisa8J3QNX5 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa8J3QNX5 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Shisa8J3QNX5 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa8J3QNX5 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa8J3QNX5 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa8J3QNX5 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa8J3QNX5 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Shisa8J3QNX5 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa8J3QNX5 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa8J3QNX5 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa8J3QNX5 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Shisa8J3QNX5 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Shisa8J3QNX5 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa8J3QNX5 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Shisa8J3QNX5 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms