Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Gm18489-201ENSMUST00000172565 551 ntBASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Gm6550-201ENSMUST00000187574 993 ntBASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Gm37153-201ENSMUST00000193637 231 ntBASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-3J3QMG8 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-3J3QMG8 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-3J3QMG8 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-3J3QMG8 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-3J3QMG8 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-3J3QMG8 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-3J3QMG8 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-3J3QMG8 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.42□□□□□ -0.26
Trav13d-3J3QMG8 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-3J3QMG8 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Trav13d-3J3QMG8 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-3J3QMG8 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.42□□□□□ -0.26
Trav13d-3J3QMG8 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.42□□□□□ -0.26
Trav13d-3J3QMG8 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-3J3QMG8 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Trav13d-3J3QMG8 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-3J3QMG8 Gm10499-201ENSMUST00000174094 934 ntBASIC13.42□□□□□ -0.26
Trav13d-3J3QMG8 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-3J3QMG8 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.42□□□□□ -0.26
Trav13d-3J3QMG8 Gm10060-201ENSMUST00000212002 111 ntBASIC13.42□□□□□ -0.26
Trav13d-3J3QMG8 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.42□□□□□ -0.26
Trav13d-3J3QMG8 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-3J3QMG8 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav13d-3J3QMG8 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.42□□□□□ -0.26
Trav13d-3J3QMG8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-3J3QMG8 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-3J3QMG8 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-3J3QMG8 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-3J3QMG8 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-3J3QMG8 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav13d-3J3QMG8 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-3J3QMG8 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Trav13d-3J3QMG8 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-3J3QMG8 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-3J3QMG8 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-3J3QMG8 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.42□□□□□ -0.26
Trav13d-3J3QMG8 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-3J3QMG8 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-3J3QMG8 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-3J3QMG8 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-3J3QMG8 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-3J3QMG8 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-3J3QMG8 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-3J3QMG8 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-3J3QMG8 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-3J3QMG8 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-3J3QMG8 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-3J3QMG8 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-3J3QMG8 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.41□□□□□ -0.26
Trav13d-3J3QMG8 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-3J3QMG8 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-3J3QMG8 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms