Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Gm2810-201ENSMUST00000118681 990 ntBASIC17.6■□□□□ 0.41
Nkx1-1G3UXB3 Gm12329-201ENSMUST00000120829 1007 ntBASIC17.6■□□□□ 0.41
Nkx1-1G3UXB3 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx1-1G3UXB3 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Nkx1-1G3UXB3 Gm28630-201ENSMUST00000187806 498 ntBASIC17.6■□□□□ 0.41
Nkx1-1G3UXB3 Gm29011-201ENSMUST00000191059 712 ntBASIC17.6■□□□□ 0.41
Nkx1-1G3UXB3 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx1-1G3UXB3 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx1-1G3UXB3 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Nkx1-1G3UXB3 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.6■□□□□ 0.41
Nkx1-1G3UXB3 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Nkx1-1G3UXB3 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx1-1G3UXB3 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx1-1G3UXB3 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx1-1G3UXB3 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx1-1G3UXB3 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx1-1G3UXB3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.6■□□□□ 0.41
Nkx1-1G3UXB3 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx1-1G3UXB3 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx1-1G3UXB3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx1-1G3UXB3 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx1-1G3UXB3 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx1-1G3UXB3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx1-1G3UXB3 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx1-1G3UXB3 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx1-1G3UXB3 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx1-1G3UXB3 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx1-1G3UXB3 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.59■□□□□ 0.41
Nkx1-1G3UXB3 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC17.59■□□□□ 0.41
Nkx1-1G3UXB3 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC17.59■□□□□ 0.41
Nkx1-1G3UXB3 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC17.59■□□□□ 0.41
Nkx1-1G3UXB3 Gm27680-201ENSMUST00000184192 160 ntBASIC17.59■□□□□ 0.41
Nkx1-1G3UXB3 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx1-1G3UXB3 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC17.59■□□□□ 0.41
Nkx1-1G3UXB3 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx1-1G3UXB3 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Nkx1-1G3UXB3 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Nkx1-1G3UXB3 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx1-1G3UXB3 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx1-1G3UXB3 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx1-1G3UXB3 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nkx1-1G3UXB3 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nkx1-1G3UXB3 Gm21064-201ENSMUST00000189723 1375 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx1-1G3UXB3 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC17.58■□□□□ 0.4
Nkx1-1G3UXB3 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx1-1G3UXB3 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Nkx1-1G3UXB3 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC17.58■□□□□ 0.4
Nkx1-1G3UXB3 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx1-1G3UXB3 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx1-1G3UXB3 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC17.58■□□□□ 0.4
Nkx1-1G3UXB3 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx1-1G3UXB3 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC17.58■□□□□ 0.4
Nkx1-1G3UXB3 Gm29667-201ENSMUST00000190817 490 ntBASIC17.58■□□□□ 0.4
Nkx1-1G3UXB3 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx1-1G3UXB3 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC17.58■□□□□ 0.4
Nkx1-1G3UXB3 Snapc5-201ENSMUST00000034965 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx1-1G3UXB3 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx1-1G3UXB3 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx1-1G3UXB3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx1-1G3UXB3 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx1-1G3UXB3 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.58■□□□□ 0.4
Nkx1-1G3UXB3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx1-1G3UXB3 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx1-1G3UXB3 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx1-1G3UXB3 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx1-1G3UXB3 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx1-1G3UXB3 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx1-1G3UXB3 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx1-1G3UXB3 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
Nkx1-1G3UXB3 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Nkx1-1G3UXB3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.57■□□□□ 0.4
Nkx1-1G3UXB3 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx1-1G3UXB3 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Nkx1-1G3UXB3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx1-1G3UXB3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx1-1G3UXB3 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx1-1G3UXB3 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx1-1G3UXB3 Asic1-205ENSMUST00000228185 1818 ntBASIC17.57■□□□□ 0.4
Nkx1-1G3UXB3 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Nkx1-1G3UXB3 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx1-1G3UXB3 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Nkx1-1G3UXB3 Gm14042-201ENSMUST00000120139 833 ntBASIC17.57■□□□□ 0.4
Nkx1-1G3UXB3 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx1-1G3UXB3 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Nkx1-1G3UXB3 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx1-1G3UXB3 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx1-1G3UXB3 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx1-1G3UXB3 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.57■□□□□ 0.4
Nkx1-1G3UXB3 Gm2272-201ENSMUST00000194903 582 ntBASIC17.57■□□□□ 0.4
Nkx1-1G3UXB3 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.57■□□□□ 0.4
Nkx1-1G3UXB3 Gm42693-201ENSMUST00000196779 631 ntBASIC17.57■□□□□ 0.4
Nkx1-1G3UXB3 Gm3786-201ENSMUST00000202659 378 ntBASIC17.57■□□□□ 0.4
Nkx1-1G3UXB3 Gm44559-201ENSMUST00000207177 1012 ntBASIC17.57■□□□□ 0.4
Nkx1-1G3UXB3 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Nkx1-1G3UXB3 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx1-1G3UXB3 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Nkx1-1G3UXB3 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx1-1G3UXB3 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.57■□□□□ 0.4
Nkx1-1G3UXB3 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx1-1G3UXB3 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms