Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc188F6WEU2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc188F6WEU2 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc188F6WEU2 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.33■□□□□ 0.04
Ccdc188F6WEU2 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.32■□□□□ 0.04
Ccdc188F6WEU2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ccdc188F6WEU2 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.32■□□□□ 0.04
Ccdc188F6WEU2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc188F6WEU2 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
Ccdc188F6WEU2 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC15.32■□□□□ 0.04
Ccdc188F6WEU2 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc188F6WEU2 Gm6244-201ENSMUST00000178732 841 ntBASIC15.32■□□□□ 0.04
Ccdc188F6WEU2 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Ccdc188F6WEU2 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC15.32■□□□□ 0.04
Ccdc188F6WEU2 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.32■□□□□ 0.04
Ccdc188F6WEU2 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.32■□□□□ 0.04
Ccdc188F6WEU2 AC155252.1-201ENSMUST00000226462 1208 ntBASIC15.32■□□□□ 0.04
Ccdc188F6WEU2 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc188F6WEU2 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc188F6WEU2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc188F6WEU2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc188F6WEU2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Ccdc188F6WEU2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc188F6WEU2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.32■□□□□ 0.04
Ccdc188F6WEU2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ccdc188F6WEU2 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc188F6WEU2 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc188F6WEU2 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc188F6WEU2 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.31■□□□□ 0.04
Ccdc188F6WEU2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc188F6WEU2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ccdc188F6WEU2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc188F6WEU2 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc188F6WEU2 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc188F6WEU2 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Ccdc188F6WEU2 Mir5132-201ENSMUST00000175166 71 ntBASIC15.31■□□□□ 0.04
Ccdc188F6WEU2 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.31■□□□□ 0.04
Ccdc188F6WEU2 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc188F6WEU2 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc188F6WEU2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc188F6WEU2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc188F6WEU2 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc188F6WEU2 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc188F6WEU2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc188F6WEU2 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc188F6WEU2 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc188F6WEU2 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc188F6WEU2 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc188F6WEU2 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc188F6WEU2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc188F6WEU2 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc188F6WEU2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc188F6WEU2 Mir692-1-201ENSMUST00000102263 109 ntBASIC15.3■□□□□ 0.04
Ccdc188F6WEU2 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc188F6WEU2 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.3■□□□□ 0.04
Ccdc188F6WEU2 Gm12341-201ENSMUST00000119724 503 ntBASIC15.3■□□□□ 0.04
Ccdc188F6WEU2 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc188F6WEU2 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC15.3■□□□□ 0.04
Ccdc188F6WEU2 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc188F6WEU2 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc188F6WEU2 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc188F6WEU2 AA619741-201ENSMUST00000195095 646 ntBASIC15.3■□□□□ 0.04
Ccdc188F6WEU2 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC15.3■□□□□ 0.04
Ccdc188F6WEU2 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.3■□□□□ 0.04
Ccdc188F6WEU2 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ccdc188F6WEU2 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC15.3■□□□□ 0.04
Ccdc188F6WEU2 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC15.3■□□□□ 0.04
Ccdc188F6WEU2 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC15.3■□□□□ 0.04
Ccdc188F6WEU2 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC15.3■□□□□ 0.04
Ccdc188F6WEU2 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.3■□□□□ 0.04
Ccdc188F6WEU2 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc188F6WEU2 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc188F6WEU2 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc188F6WEU2 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc188F6WEU2 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc188F6WEU2 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ccdc188F6WEU2 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ccdc188F6WEU2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc188F6WEU2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc188F6WEU2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc188F6WEU2 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ccdc188F6WEU2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc188F6WEU2 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc188F6WEU2 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc188F6WEU2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc188F6WEU2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc188F6WEU2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Ccdc188F6WEU2 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc188F6WEU2 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.29■□□□□ 0.04
Ccdc188F6WEU2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ccdc188F6WEU2 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ccdc188F6WEU2 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc188F6WEU2 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc188F6WEU2 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC15.29■□□□□ 0.04
Ccdc188F6WEU2 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc188F6WEU2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc188F6WEU2 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC15.29■□□□□ 0.04
Ccdc188F6WEU2 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC15.29■□□□□ 0.04
Ccdc188F6WEU2 Gm5940-201ENSMUST00000117582 1068 ntBASIC15.29■□□□□ 0.04
Ccdc188F6WEU2 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms