Protein–RNA interactions for Protein: F6SW83

Gm10477, Predicted gene 10477, mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10477F6SW83 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10477F6SW83 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10477F6SW83 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10477F6SW83 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10477F6SW83 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Gm10477F6SW83 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10477F6SW83 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10477F6SW83 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
Gm10477F6SW83 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10477F6SW83 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Gm10477F6SW83 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10477F6SW83 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.2□□□□□ -0.14
Gm10477F6SW83 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10477F6SW83 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10477F6SW83 Gm44878-201ENSMUST00000205812 1295 ntBASIC14.2□□□□□ -0.14
Gm10477F6SW83 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.2□□□□□ -0.14
Gm10477F6SW83 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10477F6SW83 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10477F6SW83 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10477F6SW83 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
Gm10477F6SW83 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10477F6SW83 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10477F6SW83 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.2□□□□□ -0.14
Gm10477F6SW83 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10477F6SW83 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Gm10477F6SW83 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Gm10477F6SW83 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10477F6SW83 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10477F6SW83 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10477F6SW83 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.2□□□□□ -0.14
Gm10477F6SW83 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10477F6SW83 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10477F6SW83 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Gm10477F6SW83 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10477F6SW83 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10477F6SW83 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10477F6SW83 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10477F6SW83 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10477F6SW83 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Gm10477F6SW83 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Gm10477F6SW83 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10477F6SW83 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.19□□□□□ -0.14
Gm10477F6SW83 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.19□□□□□ -0.14
Gm10477F6SW83 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10477F6SW83 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10477F6SW83 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10477F6SW83 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10477F6SW83 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.19□□□□□ -0.14
Gm10477F6SW83 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10477F6SW83 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10477F6SW83 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Gm10477F6SW83 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.19□□□□□ -0.14
Gm10477F6SW83 Gm11539-201ENSMUST00000119837 557 ntBASIC14.19□□□□□ -0.14
Gm10477F6SW83 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.19□□□□□ -0.14
Gm10477F6SW83 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Gm10477F6SW83 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.19□□□□□ -0.14
Gm10477F6SW83 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.19□□□□□ -0.14
Gm10477F6SW83 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.19□□□□□ -0.14
Gm10477F6SW83 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.19□□□□□ -0.14
Gm10477F6SW83 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Gm10477F6SW83 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10477F6SW83 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10477F6SW83 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10477F6SW83 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10477F6SW83 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Gm10477F6SW83 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10477F6SW83 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10477F6SW83 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10477F6SW83 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10477F6SW83 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10477F6SW83 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10477F6SW83 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10477F6SW83 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Gm10477F6SW83 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10477F6SW83 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10477F6SW83 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.18□□□□□ -0.14
Gm10477F6SW83 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Gm10477F6SW83 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10477F6SW83 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.18□□□□□ -0.14
Gm10477F6SW83 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.18□□□□□ -0.14
Gm10477F6SW83 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10477F6SW83 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10477F6SW83 Gm12008-201ENSMUST00000117791 755 ntBASIC14.18□□□□□ -0.14
Gm10477F6SW83 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC14.18□□□□□ -0.14
Gm10477F6SW83 Gm27275-201ENSMUST00000184318 272 ntBASIC14.18□□□□□ -0.14
Gm10477F6SW83 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.18□□□□□ -0.14
Gm10477F6SW83 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10477F6SW83 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10477F6SW83 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10477F6SW83 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10477F6SW83 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10477F6SW83 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Gm10477F6SW83 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10477F6SW83 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10477F6SW83 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Gm10477F6SW83 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Gm10477F6SW83 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10477F6SW83 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Gm10477F6SW83 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10477F6SW83 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms