Protein–RNA interactions for Protein: E9Q9Y3

Ccdc7b, Coiled-coil domain-containing 7B, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7bE9Q9Y3 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Gm15372-201ENSMUST00000120729 834 ntBASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc7bE9Q9Y3 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc7bE9Q9Y3 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Ccdc7bE9Q9Y3 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc7bE9Q9Y3 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc7bE9Q9Y3 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc7bE9Q9Y3 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc7bE9Q9Y3 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc7bE9Q9Y3 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc7bE9Q9Y3 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc7bE9Q9Y3 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc7bE9Q9Y3 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc7bE9Q9Y3 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc7bE9Q9Y3 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc7bE9Q9Y3 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc7bE9Q9Y3 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ccdc7bE9Q9Y3 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.33□□□□□ -0.12
Ccdc7bE9Q9Y3 Gm28033-201ENSMUST00000184224 96 ntBASIC14.33□□□□□ -0.12
Ccdc7bE9Q9Y3 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.33□□□□□ -0.12
Ccdc7bE9Q9Y3 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.33□□□□□ -0.12
Ccdc7bE9Q9Y3 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc7bE9Q9Y3 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Ccdc7bE9Q9Y3 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc7bE9Q9Y3 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc7bE9Q9Y3 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc7bE9Q9Y3 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc7bE9Q9Y3 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc7bE9Q9Y3 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.33□□□□□ -0.12
Ccdc7bE9Q9Y3 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc7bE9Q9Y3 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc7bE9Q9Y3 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7bE9Q9Y3 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7bE9Q9Y3 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7bE9Q9Y3 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7bE9Q9Y3 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7bE9Q9Y3 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7bE9Q9Y3 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7bE9Q9Y3 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7bE9Q9Y3 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.32□□□□□ -0.12
Ccdc7bE9Q9Y3 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.32□□□□□ -0.12
Ccdc7bE9Q9Y3 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc7bE9Q9Y3 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7bE9Q9Y3 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7bE9Q9Y3 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Ccdc7bE9Q9Y3 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.32□□□□□ -0.12
Ccdc7bE9Q9Y3 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Ccdc7bE9Q9Y3 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Ccdc7bE9Q9Y3 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Ccdc7bE9Q9Y3 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7bE9Q9Y3 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.32□□□□□ -0.12
Ccdc7bE9Q9Y3 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7bE9Q9Y3 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7bE9Q9Y3 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ccdc7bE9Q9Y3 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.32□□□□□ -0.12
Ccdc7bE9Q9Y3 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.32□□□□□ -0.12
Ccdc7bE9Q9Y3 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc7bE9Q9Y3 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc7bE9Q9Y3 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc7bE9Q9Y3 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc7bE9Q9Y3 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc7bE9Q9Y3 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc7bE9Q9Y3 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc7bE9Q9Y3 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc7bE9Q9Y3 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc7bE9Q9Y3 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Ccdc7bE9Q9Y3 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc7bE9Q9Y3 Gm12895-201ENSMUST00000122214 226 ntBASIC14.31□□□□□ -0.12
Ccdc7bE9Q9Y3 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc7bE9Q9Y3 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.31□□□□□ -0.12
Ccdc7bE9Q9Y3 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccdc7bE9Q9Y3 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms