Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
R3hdm1E9Q9Q2 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
R3hdm1E9Q9Q2 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
R3hdm1E9Q9Q2 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
R3hdm1E9Q9Q2 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
R3hdm1E9Q9Q2 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
R3hdm1E9Q9Q2 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
R3hdm1E9Q9Q2 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
R3hdm1E9Q9Q2 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
R3hdm1E9Q9Q2 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
R3hdm1E9Q9Q2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
R3hdm1E9Q9Q2 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
R3hdm1E9Q9Q2 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
R3hdm1E9Q9Q2 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
R3hdm1E9Q9Q2 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.84■□□□□ 0.29
R3hdm1E9Q9Q2 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
R3hdm1E9Q9Q2 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.84■□□□□ 0.29
R3hdm1E9Q9Q2 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
R3hdm1E9Q9Q2 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.84■□□□□ 0.29
R3hdm1E9Q9Q2 Gm18489-201ENSMUST00000172565 551 ntBASIC16.84■□□□□ 0.29
R3hdm1E9Q9Q2 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.84■□□□□ 0.29
R3hdm1E9Q9Q2 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
R3hdm1E9Q9Q2 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
R3hdm1E9Q9Q2 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
R3hdm1E9Q9Q2 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
R3hdm1E9Q9Q2 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
R3hdm1E9Q9Q2 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
R3hdm1E9Q9Q2 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
R3hdm1E9Q9Q2 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
R3hdm1E9Q9Q2 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
R3hdm1E9Q9Q2 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.84■□□□□ 0.29
R3hdm1E9Q9Q2 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
R3hdm1E9Q9Q2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
R3hdm1E9Q9Q2 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.84■□□□□ 0.29
R3hdm1E9Q9Q2 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
R3hdm1E9Q9Q2 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
R3hdm1E9Q9Q2 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
R3hdm1E9Q9Q2 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
R3hdm1E9Q9Q2 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.84■□□□□ 0.29
R3hdm1E9Q9Q2 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.84■□□□□ 0.29
R3hdm1E9Q9Q2 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
R3hdm1E9Q9Q2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
R3hdm1E9Q9Q2 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
R3hdm1E9Q9Q2 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.83■□□□□ 0.28
R3hdm1E9Q9Q2 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
R3hdm1E9Q9Q2 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.83■□□□□ 0.28
R3hdm1E9Q9Q2 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.83■□□□□ 0.28
R3hdm1E9Q9Q2 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.83■□□□□ 0.28
R3hdm1E9Q9Q2 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.83■□□□□ 0.28
R3hdm1E9Q9Q2 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.83■□□□□ 0.28
R3hdm1E9Q9Q2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
R3hdm1E9Q9Q2 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
R3hdm1E9Q9Q2 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
R3hdm1E9Q9Q2 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
R3hdm1E9Q9Q2 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
R3hdm1E9Q9Q2 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
R3hdm1E9Q9Q2 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.83■□□□□ 0.28
R3hdm1E9Q9Q2 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
R3hdm1E9Q9Q2 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
R3hdm1E9Q9Q2 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.83■□□□□ 0.28
R3hdm1E9Q9Q2 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
R3hdm1E9Q9Q2 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
R3hdm1E9Q9Q2 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
R3hdm1E9Q9Q2 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.82■□□□□ 0.28
R3hdm1E9Q9Q2 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
R3hdm1E9Q9Q2 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
R3hdm1E9Q9Q2 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
R3hdm1E9Q9Q2 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
R3hdm1E9Q9Q2 App-207ENSMUST00000227737 2827 ntBASIC16.82■□□□□ 0.28
R3hdm1E9Q9Q2 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
R3hdm1E9Q9Q2 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
R3hdm1E9Q9Q2 Gm7774-201ENSMUST00000200064 533 ntBASIC16.82■□□□□ 0.28
R3hdm1E9Q9Q2 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.82■□□□□ 0.28
R3hdm1E9Q9Q2 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.82■□□□□ 0.28
R3hdm1E9Q9Q2 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
R3hdm1E9Q9Q2 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
R3hdm1E9Q9Q2 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
R3hdm1E9Q9Q2 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
R3hdm1E9Q9Q2 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
R3hdm1E9Q9Q2 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
R3hdm1E9Q9Q2 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
R3hdm1E9Q9Q2 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
R3hdm1E9Q9Q2 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
R3hdm1E9Q9Q2 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
R3hdm1E9Q9Q2 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
R3hdm1E9Q9Q2 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
R3hdm1E9Q9Q2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
R3hdm1E9Q9Q2 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
R3hdm1E9Q9Q2 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
R3hdm1E9Q9Q2 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
R3hdm1E9Q9Q2 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
R3hdm1E9Q9Q2 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
R3hdm1E9Q9Q2 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
R3hdm1E9Q9Q2 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
R3hdm1E9Q9Q2 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
R3hdm1E9Q9Q2 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
R3hdm1E9Q9Q2 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
R3hdm1E9Q9Q2 Gm27437-201ENSMUST00000183429 107 ntBASIC16.81■□□□□ 0.28
R3hdm1E9Q9Q2 Gm43767-201ENSMUST00000198933 381 ntBASIC16.81■□□□□ 0.28
R3hdm1E9Q9Q2 Gm20553-201ENSMUST00000204205 844 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms