Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Col6a3E9PWQ3 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col6a3E9PWQ3 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC15.07■□□□□ 0
Col6a3E9PWQ3 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC15.07■□□□□ 0
Col6a3E9PWQ3 CT009718.3-201ENSMUST00000221116 367 ntBASIC15.07■□□□□ 0
Col6a3E9PWQ3 Gm16476-201ENSMUST00000221544 139 ntBASIC15.07■□□□□ 0
Col6a3E9PWQ3 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col6a3E9PWQ3 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Col6a3E9PWQ3 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col6a3E9PWQ3 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Col6a3E9PWQ3 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col6a3E9PWQ3 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Col6a3E9PWQ3 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.07■□□□□ 0
Col6a3E9PWQ3 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col6a3E9PWQ3 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Col6a3E9PWQ3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col6a3E9PWQ3 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col6a3E9PWQ3 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.06■□□□□ 0
Col6a3E9PWQ3 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.06■□□□□ 0
Col6a3E9PWQ3 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
Col6a3E9PWQ3 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col6a3E9PWQ3 Gm43758-201ENSMUST00000199500 367 ntBASIC15.06■□□□□ 0
Col6a3E9PWQ3 Gm9229-201ENSMUST00000222777 126 ntBASIC15.06■□□□□ 0
Col6a3E9PWQ3 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col6a3E9PWQ3 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15.06■□□□□ 0
Col6a3E9PWQ3 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.06■□□□□ 0
Col6a3E9PWQ3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col6a3E9PWQ3 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Col6a3E9PWQ3 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col6a3E9PWQ3 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.06■□□□□ 0
Col6a3E9PWQ3 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col6a3E9PWQ3 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Col6a3E9PWQ3 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.06■□□□□ 0
Col6a3E9PWQ3 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col6a3E9PWQ3 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col6a3E9PWQ3 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.06■□□□□ 0
Col6a3E9PWQ3 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col6a3E9PWQ3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.06■□□□□ 0
Col6a3E9PWQ3 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col6a3E9PWQ3 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col6a3E9PWQ3 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Col6a3E9PWQ3 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC15.05■□□□□ 0
Col6a3E9PWQ3 Gm12384-201ENSMUST00000119228 919 ntBASIC15.05■□□□□ 0
Col6a3E9PWQ3 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Col6a3E9PWQ3 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Col6a3E9PWQ3 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Col6a3E9PWQ3 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
Col6a3E9PWQ3 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Col6a3E9PWQ3 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Col6a3E9PWQ3 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Col6a3E9PWQ3 Gm38266-201ENSMUST00000194931 421 ntBASIC15.05■□□□□ -0
Col6a3E9PWQ3 Gm18307-201ENSMUST00000206864 949 ntBASIC15.05■□□□□ -0
Col6a3E9PWQ3 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC15.05■□□□□ -0
Col6a3E9PWQ3 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col6a3E9PWQ3 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col6a3E9PWQ3 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.05■□□□□ -0
Col6a3E9PWQ3 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col6a3E9PWQ3 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Col6a3E9PWQ3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col6a3E9PWQ3 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col6a3E9PWQ3 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Col6a3E9PWQ3 Mir6979-201ENSMUST00000183927 56 ntBASIC15.05■□□□□ -0
Col6a3E9PWQ3 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col6a3E9PWQ3 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC15.05■□□□□ -0
Col6a3E9PWQ3 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col6a3E9PWQ3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col6a3E9PWQ3 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Col6a3E9PWQ3 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col6a3E9PWQ3 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.04■□□□□ -0
Col6a3E9PWQ3 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Col6a3E9PWQ3 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col6a3E9PWQ3 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col6a3E9PWQ3 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC15.04■□□□□ -0
Col6a3E9PWQ3 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Col6a3E9PWQ3 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC15.04■□□□□ -0
Col6a3E9PWQ3 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col6a3E9PWQ3 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col6a3E9PWQ3 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col6a3E9PWQ3 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col6a3E9PWQ3 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col6a3E9PWQ3 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
Col6a3E9PWQ3 Gm27847-201ENSMUST00000183711 107 ntBASIC15.04■□□□□ -0
Col6a3E9PWQ3 Gm27375-201ENSMUST00000183799 107 ntBASIC15.04■□□□□ -0
Col6a3E9PWQ3 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.04■□□□□ -0
Col6a3E9PWQ3 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col6a3E9PWQ3 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col6a3E9PWQ3 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col6a3E9PWQ3 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col6a3E9PWQ3 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col6a3E9PWQ3 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.04■□□□□ -0
Col6a3E9PWQ3 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col6a3E9PWQ3 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC15.04■□□□□ -0
Col6a3E9PWQ3 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC15.04■□□□□ -0
Col6a3E9PWQ3 AC139580.1-202ENSMUST00000223574 928 ntBASIC15.04■□□□□ -0
Col6a3E9PWQ3 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col6a3E9PWQ3 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.03■□□□□ -0
Col6a3E9PWQ3 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Col6a3E9PWQ3 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col6a3E9PWQ3 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC15.03■□□□□ -0
Col6a3E9PWQ3 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms